Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3151

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
3,643,346	-				-0.6
3,643,365	+				+0.4
3,643,365	+				-0.6
3,643,366	-				-1.2
3,643,366	-				+0.8
3,643,366	-				-0.4
3,643,366	-				-1.2
3,643,412	-				-1.6
3,643,412	-				-0.6
3,643,452	+				+0.4
3,643,452	+				-2.8
3,643,452	+				-0.2
3,643,452	+				+0.4
3,643,452	+				+0.4
3,643,452	+				-0.6
3,643,452	+				+0.4
3,643,504	+				-2.0
3,643,505	-				-2.8
3,643,505	-				+0.4
3,643,522	+				-1.4
3,643,618	+		Pf6N2E2_3151	0.20	+0.4
3,643,618	+		Pf6N2E2_3151	0.20	+0.4
3,643,618	+		Pf6N2E2_3151	0.20	+0.4
3,643,620	+		Pf6N2E2_3151	0.21	+0.4
3,643,803	+		Pf6N2E2_3151	0.43	-1.2
3,643,804	-		Pf6N2E2_3151	0.43	-3.5
3,643,867	+		Pf6N2E2_3151	0.51	-2.8
3,644,222	-				-0.6
3,644,248	+				-0.2
3,644,248	+				-1.1
3,644,283	+				-1.2
3,644,283	+				-0.8
3,644,283	+				-0.6
3,644,283	+				+0.4
3,644,283	+				+0.4
3,644,283	+				-0.6
3,644,283	+				-2.6
3,644,284	-				-1.2
3,644,284	-				+0.4
3,644,284	-				+0.4
3,644,284	-				-0.6
3,644,284	-				-0.6
3,644,284	-				-1.2
3,644,284	-				-1.5
3,644,284	-				-0.6
3,644,581	+		Pf6N2E2_3152	0.24	+0.4
3,644,581	+		Pf6N2E2_3152	0.24	-0.1
3,644,582	-		Pf6N2E2_3152	0.24	-0.2
3,644,651	+		Pf6N2E2_3152	0.30	+0.4
3,644,652	-		Pf6N2E2_3152	0.30	+0.4
3,644,668	+		Pf6N2E2_3152	0.31	+0.4
3,644,691	+		Pf6N2E2_3152	0.33	+0.4
3,644,692	-		Pf6N2E2_3152	0.33	-0.6
3,644,692	-		Pf6N2E2_3152	0.33	+0.4
3,645,079	+		Pf6N2E2_3152	0.64	+0.4
3,645,079	+		Pf6N2E2_3152	0.64	-0.4
3,645,080	-		Pf6N2E2_3152	0.65	+0.4
3,645,080	-		Pf6N2E2_3152	0.65	-1.6
3,645,080	-		Pf6N2E2_3152	0.65	+0.4
3,645,080	-		Pf6N2E2_3152	0.65	-1.2
3,645,080	-		Pf6N2E2_3152	0.65	+0.4
3,645,167	-		Pf6N2E2_3152	0.72	-0.7