Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3078

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
3,565,383	+		Pf6N2E2_3076	0.82	+0.4
3,565,383	+		Pf6N2E2_3076	0.82	-1.2
3,565,383	+		Pf6N2E2_3076	0.82	+0.4
3,565,384	-		Pf6N2E2_3076	0.82	-0.6
3,565,384	-		Pf6N2E2_3076	0.82	+0.4
3,565,435	+		Pf6N2E2_3076	0.86	-0.6
3,565,435	+		Pf6N2E2_3076	0.86	+0.4
3,565,435	+		Pf6N2E2_3076	0.86	+0.4
3,565,436	-		Pf6N2E2_3076	0.86	-0.1
3,565,436	-		Pf6N2E2_3076	0.86	+0.4
3,565,436	-		Pf6N2E2_3076	0.86	-1.2
3,565,436	-		Pf6N2E2_3076	0.86	-0.6
3,565,436	-		Pf6N2E2_3076	0.86	+0.4
3,565,436	-		Pf6N2E2_3076	0.86	-0.6
3,565,436	-		Pf6N2E2_3076	0.86	+0.4
3,565,437	+		Pf6N2E2_3076	0.86	-1.5
3,565,438	-		Pf6N2E2_3076	0.86	-0.6
3,565,666	-				-0.6
3,565,666	-				+0.6
3,565,830	+				+0.4
3,565,899	+		Pf6N2E2_3077	0.25	-0.6
3,565,899	+		Pf6N2E2_3077	0.25	-0.6
3,565,919	+		Pf6N2E2_3077	0.31	+0.4
3,566,150	+				+0.4
3,566,150	+				-0.5
3,566,150	+				+0.4
3,566,150	+				+0.4
3,566,150	+				-0.6
3,566,150	+				-0.6
3,566,150	+				-1.2
3,566,150	+				-0.6
3,566,150	+				-0.6
3,566,150	+				-0.6
3,566,150	+				+0.4
3,566,168	+				+0.4
3,567,235	+				-0.6
3,567,235	+				+0.4
3,567,235	+				-0.6
3,567,235	+				-0.6
3,567,235	+				+0.4
3,567,236	-				-1.2
3,567,236	-				-0.6
3,567,236	-				-0.6
3,567,236	-				+0.4
3,567,236	-				+0.4
3,567,236	-				-0.4
3,567,389	+				-0.1
3,567,390	-				+0.4
3,567,481	+				+0.4
3,567,482	-				+0.4
3,567,482	-				+0.4
3,567,541	+		Pf6N2E2_3079	0.11	+1.9
3,567,541	+		Pf6N2E2_3079	0.11	-1.2
3,567,541	+		Pf6N2E2_3079	0.11	+0.4
3,567,541	+		Pf6N2E2_3079	0.11	-0.6
3,567,542	-		Pf6N2E2_3079	0.11	+0.0
3,567,542	-		Pf6N2E2_3079	0.11	+0.4
3,567,542	-		Pf6N2E2_3079	0.11	+0.4
3,567,542	-		Pf6N2E2_3079	0.11	-2.2
3,567,544	+		Pf6N2E2_3079	0.11	+0.4
3,567,544	+		Pf6N2E2_3079	0.11	+0.4
3,567,545	-		Pf6N2E2_3079	0.11	+0.4
3,567,728	+		Pf6N2E2_3079	0.26	+0.4
3,567,729	-		Pf6N2E2_3079	0.26	+0.4
3,567,729	-		Pf6N2E2_3079	0.26	-0.6
3,567,921	-		Pf6N2E2_3079	0.42	-0.5
3,568,060	+		Pf6N2E2_3079	0.54	-0.6
3,568,061	-		Pf6N2E2_3079	0.54	+0.4