Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3073

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
3,559,337	-		Pf6N2E2_3072	0.68	+0.4
3,559,750	+		Pf6N2E2_3072	0.83	-2.4
3,560,004	+				+0.4
3,560,098	-				-2.2
3,560,196	+				-1.2
3,560,196	+				+0.4
3,560,196	+				-0.6
3,560,196	+				-0.6
3,560,197	-				-0.6
3,560,197	-				-1.8
3,560,197	-				-0.6
3,560,197	-				-0.6
3,560,197	-				-0.6
3,560,197	-				-1.2
3,560,450	-		Pf6N2E2_3073	0.15	-1.8
3,560,535	-		Pf6N2E2_3073	0.22	-0.6
3,560,650	+		Pf6N2E2_3073	0.32	-1.2
3,560,650	+		Pf6N2E2_3073	0.32	+0.4
3,560,660	-		Pf6N2E2_3073	0.33	-2.6
3,560,698	+		Pf6N2E2_3073	0.36	+0.4
3,560,698	+		Pf6N2E2_3073	0.36	+0.4
3,560,893	+		Pf6N2E2_3073	0.52	-1.6
3,560,893	+		Pf6N2E2_3073	0.52	+0.4
3,560,893	+		Pf6N2E2_3073	0.52	-0.6
3,560,893	+		Pf6N2E2_3073	0.52	-0.6
3,560,894	-		Pf6N2E2_3073	0.52	+0.4
3,560,905	+		Pf6N2E2_3073	0.53	-0.6
3,560,905	+		Pf6N2E2_3073	0.53	-1.2
3,560,905	+		Pf6N2E2_3073	0.53	+0.4
3,560,905	+		Pf6N2E2_3073	0.53	+0.4
3,560,906	-		Pf6N2E2_3073	0.53	-0.6
3,561,088	+		Pf6N2E2_3073	0.68	-2.4
3,561,088	+		Pf6N2E2_3073	0.68	-1.2
3,561,158	+		Pf6N2E2_3073	0.74	-2.0
3,561,158	+		Pf6N2E2_3073	0.74	-1.9
3,561,159	-		Pf6N2E2_3073	0.74	-1.2
3,561,159	-		Pf6N2E2_3073	0.74	+0.4
3,561,253	+		Pf6N2E2_3073	0.82	-0.6
3,561,253	+		Pf6N2E2_3073	0.82	-1.4
3,561,253	+		Pf6N2E2_3073	0.82	+0.4
3,561,253	+		Pf6N2E2_3073	0.82	+0.4
3,561,254	-		Pf6N2E2_3073	0.82	+0.4
3,561,254	-		Pf6N2E2_3073	0.82	+0.4
3,561,340	+		Pf6N2E2_3073	0.89	+0.4
3,561,340	+		Pf6N2E2_3073	0.89	-0.0
3,561,340	+		Pf6N2E2_3073	0.89	-0.6
3,561,576	-				-1.2
3,561,661	+				-2.0
3,561,661	+				+0.4
3,561,661	+				-1.2
3,561,781	+				+0.4
3,561,781	+				-0.6
3,561,781	+				-0.6
3,561,781	+				+0.4
3,561,782	-				+0.4
3,561,782	-				-2.0
3,561,785	+				+0.4
3,561,785	+				+0.4
3,561,785	+				+0.4
3,561,785	+				+0.4
3,561,785	+				+0.4
3,561,786	-				+0.4
3,561,786	-				-0.6
3,561,845	+				-1.2
3,561,846	-				+0.4
3,561,892	+				-1.2
3,561,892	+				+0.4
3,561,970	+				-6.0
3,561,970	+				+0.4
3,562,250	+		Pf6N2E2_3074	0.87	-0.6
3,562,250	+		Pf6N2E2_3074	0.87	+0.4
3,562,285	+				-0.4
3,562,286	-				-0.1
3,562,431	-				+0.4
3,562,431	-				+1.9
3,562,445	+				-0.6
3,562,445	+				-0.6
3,562,445	+				-0.6
3,562,445	+				-1.2
3,562,445	+				-0.4
3,562,446	-				-0.6
3,562,446	-				+0.4
3,562,449	+				-0.6
3,562,449	+				+0.4
3,562,449	+				+0.4
3,562,449	+				+0.4
3,562,450	-				-1.2
3,562,450	-				+1.9