Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2971

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
3,460,068	+		Pf6N2E2_2969	0.77	+0.3
3,460,068	+		Pf6N2E2_2969	0.77	-0.7
3,460,068	+		Pf6N2E2_2969	0.77	+0.3
3,460,069	-		Pf6N2E2_2969	0.78	-0.7
3,460,069	-		Pf6N2E2_2969	0.78	+0.3
3,460,069	-		Pf6N2E2_2969	0.78	+0.3
3,460,069	-		Pf6N2E2_2969	0.78	+0.3
3,460,069	-		Pf6N2E2_2969	0.78	+0.3
3,460,069	-		Pf6N2E2_2969	0.78	+0.3
3,460,069	-		Pf6N2E2_2969	0.78	-1.7
3,460,069	-		Pf6N2E2_2969	0.78	-1.2
3,460,069	-		Pf6N2E2_2969	0.78	-0.7
3,460,069	-		Pf6N2E2_2969	0.78	+0.3
3,460,107	-		Pf6N2E2_2969	0.81	-0.7
3,460,149	+		Pf6N2E2_2969	0.86	+0.3
3,460,286	-				-1.2
3,460,294	+				-1.2
3,460,294	+				-0.7
3,460,295	-				-1.2
3,460,295	-				-0.9
3,460,295	-				+0.3
3,460,295	-				-0.2
3,460,408	+				-0.7
3,460,409	-				-0.1
3,460,415	+				-1.2
3,460,415	+				+0.3
3,460,415	+				-0.5
3,460,415	+				-0.7
3,460,416	-				-0.7
3,460,416	-				-1.4
3,460,420	+				-1.7
3,460,420	+				+0.0
3,460,420	+				+0.3
3,460,449	+				-0.1
3,460,449	+				-0.7
3,460,450	-				-1.7
3,460,450	-				+0.3
3,460,510	-		Pf6N2E2_2970	0.16	+0.3
3,460,510	-		Pf6N2E2_2970	0.16	+0.3
3,460,763	+		Pf6N2E2_2970	0.88	-1.0
3,460,763	+		Pf6N2E2_2970	0.88	+0.3
3,460,764	-		Pf6N2E2_2970	0.88	+0.3
3,460,859	-				-3.2
3,460,887	-				+0.3
3,460,943	+				-2.9
3,460,943	+				-2.6
3,460,943	+				-3.5
3,460,943	+				+0.3
3,460,944	-				+0.3
3,460,944	-				-1.8
3,460,944	-				-1.2
3,460,944	-				-2.7
3,460,950	+				-0.7
3,460,951	-				-0.7
3,460,951	-				-2.2
3,460,951	-				+0.3
3,460,951	-				+0.3
3,460,951	-				-0.7
3,461,036	+		Pf6N2E2_2971	0.12	-2.5
3,461,036	+		Pf6N2E2_2971	0.12	+1.3
3,461,036	+		Pf6N2E2_2971	0.12	-1.2
3,461,037	-		Pf6N2E2_2971	0.12	+0.3
3,461,037	-		Pf6N2E2_2971	0.12	+0.3
3,461,037	-		Pf6N2E2_2971	0.12	-1.2
3,461,044	+		Pf6N2E2_2971	0.12	-1.7
3,461,044	+		Pf6N2E2_2971	0.12	-3.0
3,461,044	+		Pf6N2E2_2971	0.12	-3.2
3,461,044	+		Pf6N2E2_2971	0.12	-2.8
3,461,044	+		Pf6N2E2_2971	0.12	-3.2
3,461,044	+		Pf6N2E2_2971	0.12	-3.5
3,461,044	+		Pf6N2E2_2971	0.12	-2.7
3,461,044	+		Pf6N2E2_2971	0.12	-2.7
3,461,045	-		Pf6N2E2_2971	0.12	+0.3
3,461,142	+		Pf6N2E2_2971	0.19	-1.7
3,461,142	+		Pf6N2E2_2971	0.19	-2.2
3,461,143	-		Pf6N2E2_2971	0.19	+0.3
3,461,143	-		Pf6N2E2_2971	0.19	-2.6
3,461,312	+		Pf6N2E2_2971	0.30	+0.3
3,461,312	+		Pf6N2E2_2971	0.30	-2.8
3,461,312	+		Pf6N2E2_2971	0.30	-2.8
3,461,312	+		Pf6N2E2_2971	0.30	-1.2
3,461,312	+		Pf6N2E2_2971	0.30	-2.8
3,461,312	+		Pf6N2E2_2971	0.30	-2.0
3,461,312	+		Pf6N2E2_2971	0.30	-2.8
3,461,312	+		Pf6N2E2_2971	0.30	+0.3
3,461,313	-		Pf6N2E2_2971	0.30	+0.3
3,461,313	-		Pf6N2E2_2971	0.30	-1.9
3,461,313	-		Pf6N2E2_2971	0.30	-1.2
3,461,313	-		Pf6N2E2_2971	0.30	-3.2
3,461,313	-		Pf6N2E2_2971	0.30	+0.3
3,461,313	-		Pf6N2E2_2971	0.30	-2.9
3,461,313	-		Pf6N2E2_2971	0.30	-2.5
3,461,313	-		Pf6N2E2_2971	0.30	-3.3
3,461,313	-		Pf6N2E2_2971	0.30	+0.3
3,461,399	+		Pf6N2E2_2971	0.35	-0.7
3,461,399	+		Pf6N2E2_2971	0.35	-1.6
3,461,399	+		Pf6N2E2_2971	0.35	+0.3
3,461,399	+		Pf6N2E2_2971	0.35	-2.1
3,461,426	+		Pf6N2E2_2971	0.37	+0.3
3,461,426	+		Pf6N2E2_2971	0.37	-0.7
3,461,426	+		Pf6N2E2_2971	0.37	-2.4
3,461,427	-		Pf6N2E2_2971	0.37	-2.5
3,461,427	-		Pf6N2E2_2971	0.37	-2.5
3,461,442	+		Pf6N2E2_2971	0.38	+0.3
3,461,442	+		Pf6N2E2_2971	0.38	+0.3
3,461,443	-		Pf6N2E2_2971	0.38	-1.2
3,461,443	-		Pf6N2E2_2971	0.38	+0.3
3,461,464	+		Pf6N2E2_2971	0.39	-2.2
3,461,464	+		Pf6N2E2_2971	0.39	-2.7
3,461,464	+		Pf6N2E2_2971	0.39	+0.3
3,461,464	+		Pf6N2E2_2971	0.39	-2.7
3,461,464	+		Pf6N2E2_2971	0.39	-3.3
3,461,465	-		Pf6N2E2_2971	0.39	+0.3
3,461,465	-		Pf6N2E2_2971	0.39	-2.3
3,461,465	-		Pf6N2E2_2971	0.39	-0.7
3,461,465	-		Pf6N2E2_2971	0.39	-2.8
3,461,465	-		Pf6N2E2_2971	0.39	-0.7
3,461,526	-		Pf6N2E2_2971	0.43	+0.3
3,461,559	+		Pf6N2E2_2971	0.45	-2.4
3,461,559	+		Pf6N2E2_2971	0.45	+0.3
3,461,559	+		Pf6N2E2_2971	0.45	-1.2
3,461,560	-		Pf6N2E2_2971	0.46	-2.2
3,461,606	+		Pf6N2E2_2971	0.48	-2.0
3,461,607	-		Pf6N2E2_2971	0.49	-0.7
3,461,607	-		Pf6N2E2_2971	0.49	-2.8
3,461,607	-		Pf6N2E2_2971	0.49	-2.7
3,461,659	-		Pf6N2E2_2971	0.52	-2.6
3,461,659	-		Pf6N2E2_2971	0.52	-3.1
3,461,696	+		Pf6N2E2_2971	0.54	+0.3
3,461,696	+		Pf6N2E2_2971	0.54	-2.8
3,461,696	+		Pf6N2E2_2971	0.54	+0.3
3,461,696	+		Pf6N2E2_2971	0.54	-3.1
3,461,696	+		Pf6N2E2_2971	0.54	+0.3
3,461,696	+		Pf6N2E2_2971	0.54	-1.0
3,461,696	+		Pf6N2E2_2971	0.54	-3.6
3,461,696	+		Pf6N2E2_2971	0.54	-0.7
3,461,696	+		Pf6N2E2_2971	0.54	+0.3
3,461,697	-		Pf6N2E2_2971	0.54	-2.2
3,461,697	-		Pf6N2E2_2971	0.54	-2.8
3,461,697	-		Pf6N2E2_2971	0.54	+0.3
3,461,697	-		Pf6N2E2_2971	0.54	-1.2
3,461,697	-		Pf6N2E2_2971	0.54	-2.8
3,461,697	-		Pf6N2E2_2971	0.54	-2.0
3,461,697	-		Pf6N2E2_2971	0.54	-0.8
3,461,697	-		Pf6N2E2_2971	0.54	-2.4
3,461,698	+		Pf6N2E2_2971	0.54	-1.9
3,461,699	-		Pf6N2E2_2971	0.54	-3.7
3,461,699	-		Pf6N2E2_2971	0.54	-2.6
3,461,699	-		Pf6N2E2_2971	0.54	-0.7
3,461,828	+		Pf6N2E2_2971	0.63	+0.3
3,461,829	-		Pf6N2E2_2971	0.63	-2.9
3,461,873	+		Pf6N2E2_2971	0.66	-0.7
3,461,873	+		Pf6N2E2_2971	0.66	+0.3
3,461,874	-		Pf6N2E2_2971	0.66	-3.2
3,461,874	-		Pf6N2E2_2971	0.66	-2.8
3,461,874	-		Pf6N2E2_2971	0.66	-3.4
3,461,874	-		Pf6N2E2_2971	0.66	+0.3
3,461,976	+		Pf6N2E2_2971	0.72	+0.3
3,461,976	+		Pf6N2E2_2971	0.72	-0.7
3,461,977	-		Pf6N2E2_2971	0.72	-0.7
3,461,977	-				-1.5
3,461,977	-		Pf6N2E2_2971	0.72	+0.3
3,462,143	+		Pf6N2E2_2971	0.83	-2.8
3,462,144	-		Pf6N2E2_2971	0.83	-4.4
3,462,185	+		Pf6N2E2_2971	0.86	-0.7
3,462,236	+		Pf6N2E2_2971	0.89	-2.6
3,462,237	-		Pf6N2E2_2971	0.89	-3.1
3,462,491	+				-0.1
3,462,491	+				-0.7