Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2778

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
3,265,214	-		Pf6N2E2_2776	0.85	+0.2
3,265,241	-		Pf6N2E2_2776	0.88	+0.3
3,265,318	+				+0.3
3,265,319	-				+0.3
3,265,319	-				+0.3
3,265,371	+				-1.5
3,265,371	+				-1.1
3,265,371	+				-1.3
3,265,579	-		Pf6N2E2_2777	0.31	-1.0
3,265,705	+		Pf6N2E2_2777	0.47	-0.7
3,265,705	+		Pf6N2E2_2777	0.47	+0.3
3,265,706	-		Pf6N2E2_2777	0.47	+0.3
3,265,706	-		Pf6N2E2_2777	0.47	+0.3
3,265,706	-		Pf6N2E2_2777	0.47	-0.7
3,265,739	+		Pf6N2E2_2777	0.51	-0.7
3,265,740	-		Pf6N2E2_2777	0.51	-0.4
3,265,743	+		Pf6N2E2_2777	0.52	+0.3
3,265,744	-		Pf6N2E2_2777	0.52	-0.7
3,265,744	-		Pf6N2E2_2777	0.52	-0.8
3,266,014	-		Pf6N2E2_2777	0.86	-0.7
3,266,031	+		Pf6N2E2_2777	0.88	+0.3
3,266,031	+		Pf6N2E2_2777	0.88	+0.2
3,266,031	+		Pf6N2E2_2777	0.88	+0.3
3,266,032	-		Pf6N2E2_2777	0.88	+0.3
3,266,032	-		Pf6N2E2_2777	0.88	+0.3
3,266,032	-		Pf6N2E2_2777	0.88	+0.3
3,266,032	-		Pf6N2E2_2777	0.88	-0.7
3,266,032	-		Pf6N2E2_2777	0.88	-0.7
3,266,114	+				-2.5
3,266,159	+				+0.3
3,266,275	+		Pf6N2E2_2778	0.19	+0.3
3,266,661	+		Pf6N2E2_2778	0.72	-0.7
3,266,661	+		Pf6N2E2_2778	0.72	-0.7
3,266,673	+		Pf6N2E2_2778	0.74	-0.7
3,266,674	-		Pf6N2E2_2778	0.74	-1.7
3,267,029	+		Pf6N2E2_2779	0.24	-0.3
3,267,095	+		Pf6N2E2_2779	0.35	-0.7
3,267,096	-		Pf6N2E2_2779	0.35	+0.3
3,267,096	-		Pf6N2E2_2779	0.35	-0.7
3,267,096	-		Pf6N2E2_2779	0.35	+0.3
3,267,119	+		Pf6N2E2_2779	0.38	+0.3
3,267,119	+		Pf6N2E2_2779	0.38	+0.3
3,267,119	+		Pf6N2E2_2779	0.38	+0.0
3,267,120	-		Pf6N2E2_2779	0.38	-0.7
3,267,120	-		Pf6N2E2_2779	0.38	-1.3
3,267,221	+		Pf6N2E2_2779	0.54	-0.7
3,267,239	+		Pf6N2E2_2779	0.57	+0.3
3,267,239	+		Pf6N2E2_2779	0.57	+0.3
3,267,240	-		Pf6N2E2_2779	0.57	+0.3
3,267,263	+		Pf6N2E2_2779	0.61	-1.3
3,267,263	+		Pf6N2E2_2779	0.61	+0.3
3,267,264	-		Pf6N2E2_2779	0.61	-0.2
3,267,264	-		Pf6N2E2_2779	0.61	-0.7
3,267,264	-		Pf6N2E2_2779	0.61	-2.0
3,267,264	-		Pf6N2E2_2779	0.61	+0.3
3,267,398	+		Pf6N2E2_2779	0.82	-0.7
3,267,399	-		Pf6N2E2_2779	0.82	-0.7
3,267,399	-		Pf6N2E2_2779	0.82	-0.7
3,267,399	-		Pf6N2E2_2779	0.82	-0.9
3,267,399	-		Pf6N2E2_2779	0.82	-0.7
3,267,476	+				-1.3
3,267,476	+				-0.7
3,267,580	+				-0.7
3,267,580	+				-2.6
3,267,834	+				+0.3
3,267,834	+				+0.3
3,267,834	+				-0.9
3,267,835	-				-0.3