Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2616

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
3,073,542	-				-0.4
3,073,745	-		Pf6N2E2_2615	0.19	-0.7
3,073,745	-		Pf6N2E2_2615	0.19	+0.3
3,073,805	+		Pf6N2E2_2615	0.26	-1.3
3,073,805	+		Pf6N2E2_2615	0.26	+0.3
3,073,806	-		Pf6N2E2_2615	0.26	-0.7
3,073,806	-		Pf6N2E2_2615	0.26	-0.7
3,073,832	+		Pf6N2E2_2615	0.29	-2.0
3,073,943	+		Pf6N2E2_2615	0.42	-1.2
3,073,943	+		Pf6N2E2_2615	0.42	+0.3
3,073,944	-		Pf6N2E2_2615	0.42	-0.7
3,074,013	+		Pf6N2E2_2615	0.50	+0.7
3,074,173	-		Pf6N2E2_2615	0.69	+0.3
3,074,173	-		Pf6N2E2_2615	0.69	+0.3
3,074,173	-		Pf6N2E2_2615	0.69	-0.7
3,074,173	-		Pf6N2E2_2615	0.69	+0.3
3,074,199	-		Pf6N2E2_2615	0.72	-0.7
3,074,358	+				+0.3
3,074,428	+				+0.3
3,074,429	-				-1.7
3,074,439	+				+0.3
3,074,439	+				-0.7
3,074,548	+				-0.9
3,074,548	+				+0.3
3,074,548	+				+0.3
3,074,549	-				-0.5
3,074,549	-				+0.3
3,074,549	-				+0.3
3,074,563	-		Pf6N2E2_2616	0.10	+0.3
3,074,570	+		Pf6N2E2_2616	0.11	+0.3
3,074,588	+		Pf6N2E2_2616	0.12	-0.7
3,074,588	+		Pf6N2E2_2616	0.12	-0.7
3,074,588	+		Pf6N2E2_2616	0.12	-1.3
3,074,588	+		Pf6N2E2_2616	0.12	-1.2
3,074,589	-		Pf6N2E2_2616	0.12	+0.3
3,074,589	-		Pf6N2E2_2616	0.12	+0.3
3,074,589	-		Pf6N2E2_2616	0.12	+0.9
3,074,589	-		Pf6N2E2_2616	0.12	+0.3
3,074,589	-		Pf6N2E2_2616	0.12	+0.3
3,074,611	+		Pf6N2E2_2616	0.14	+0.3
3,074,611	+		Pf6N2E2_2616	0.14	-1.3
3,074,611	+		Pf6N2E2_2616	0.14	-0.7
3,074,612	-		Pf6N2E2_2616	0.14	-0.7
3,074,612	-		Pf6N2E2_2616	0.14	+0.3
3,074,612	-		Pf6N2E2_2616	0.14	-0.6
3,074,612	-		Pf6N2E2_2616	0.14	+0.3
3,074,677	+		Pf6N2E2_2616	0.20	+0.5
3,074,677	+		Pf6N2E2_2616	0.20	-0.7
3,074,677	+		Pf6N2E2_2616	0.20	+0.3
3,074,677	+		Pf6N2E2_2616	0.20	+0.3
3,074,677	+		Pf6N2E2_2616	0.20	-2.0
3,074,678	-		Pf6N2E2_2616	0.20	-0.7
3,074,678	-		Pf6N2E2_2616	0.20	-0.1
3,074,678	-		Pf6N2E2_2616	0.20	+0.3
3,074,678	-		Pf6N2E2_2616	0.20	-0.7
3,074,678	-		Pf6N2E2_2616	0.20	-0.7
3,074,685	+		Pf6N2E2_2616	0.20	+0.5
3,074,685	+		Pf6N2E2_2616	0.20	+0.3
3,074,686	-		Pf6N2E2_2616	0.20	-2.0
3,074,691	-		Pf6N2E2_2616	0.21	+0.3
3,074,806	+		Pf6N2E2_2616	0.30	-1.9
3,074,807	-		Pf6N2E2_2616	0.30	+0.3
3,074,809	+		Pf6N2E2_2616	0.30	+0.3
3,074,809	+		Pf6N2E2_2616	0.30	+0.3
3,074,810	-		Pf6N2E2_2616	0.30	-0.3
3,074,810	-		Pf6N2E2_2616	0.30	+0.3
3,074,810	-		Pf6N2E2_2616	0.30	-0.7
3,075,004	+		Pf6N2E2_2616	0.46	+0.3
3,075,004	+		Pf6N2E2_2616	0.46	-0.7
3,075,005	-		Pf6N2E2_2616	0.46	-1.4
3,075,005	-		Pf6N2E2_2616	0.46	+0.3
3,075,005	-		Pf6N2E2_2616	0.46	-1.7
3,075,005	-		Pf6N2E2_2616	0.46	+0.3
3,075,010	+		Pf6N2E2_2616	0.47	-0.5
3,075,022	+		Pf6N2E2_2616	0.48	+0.3
3,075,142	-		Pf6N2E2_2616	0.58	+0.3
3,075,409	+		Pf6N2E2_2616	0.79	+0.3
3,075,454	+		Pf6N2E2_2616	0.83	+0.3
3,075,455	-		Pf6N2E2_2616	0.83	-0.7
3,075,460	+		Pf6N2E2_2616	0.83	+0.3
3,075,460	+		Pf6N2E2_2616	0.83	+0.3
3,075,461	-		Pf6N2E2_2616	0.84	+0.3
3,075,461	-		Pf6N2E2_2616	0.84	+0.3
3,075,461	-		Pf6N2E2_2616	0.84	-1.1
3,075,461	-		Pf6N2E2_2616	0.84	+0.3
3,075,461	-		Pf6N2E2_2616	0.84	+0.3
3,075,493	+		Pf6N2E2_2616	0.86	-0.7
3,075,494	-		Pf6N2E2_2616	0.86	-0.5
3,075,494	-		Pf6N2E2_2616	0.86	+0.3
3,075,587	-				-0.7
3,075,587	-				+0.3
3,075,587	-				+0.3
3,075,609	-				-1.7
3,075,663	-				+0.3
3,075,724	+		Pf6N2E2_2617	0.12	-0.7
3,075,725	-		Pf6N2E2_2617	0.12	-1.1
3,075,799	-		Pf6N2E2_2617	0.25	-0.7
3,075,809	-		Pf6N2E2_2617	0.27	-0.7
3,075,816	+		Pf6N2E2_2617	0.28	-1.1
3,075,816	+		Pf6N2E2_2617	0.28	-1.3
3,075,817	-		Pf6N2E2_2617	0.28	+0.3
3,075,817	-		Pf6N2E2_2617	0.28	+0.3
3,075,947	+		Pf6N2E2_2617	0.51	-0.3
3,075,947	+		Pf6N2E2_2617	0.51	+0.3
3,075,947	+		Pf6N2E2_2617	0.51	-1.0
3,075,948	-		Pf6N2E2_2617	0.52	+0.3
3,076,233	-				+0.3
3,076,399	+		Pf6N2E2_2618	0.17	+0.3
3,076,399	+		Pf6N2E2_2618	0.17	-0.7
3,076,399	+		Pf6N2E2_2618	0.17	+0.3
3,076,399	+		Pf6N2E2_2618	0.17	+0.3
3,076,399	+		Pf6N2E2_2618	0.17	+1.1
3,076,400	-		Pf6N2E2_2618	0.17	-0.7
3,076,400	-		Pf6N2E2_2618	0.17	+1.0
3,076,400	-		Pf6N2E2_2618	0.17	-0.7
3,076,400	-		Pf6N2E2_2618	0.17	-0.7
3,076,400	-		Pf6N2E2_2618	0.17	-0.2
3,076,400	-		Pf6N2E2_2618	0.17	-1.3
3,076,539	-		Pf6N2E2_2618	0.30	+0.3
3,076,558	+		Pf6N2E2_2618	0.32	+0.3
3,076,559	-		Pf6N2E2_2618	0.32	+0.3
3,076,559	-		Pf6N2E2_2618	0.32	-0.7
3,076,559	-		Pf6N2E2_2618	0.32	-0.7
3,076,559	-		Pf6N2E2_2618	0.32	+0.3
3,076,618	+		Pf6N2E2_2618	0.37	+0.3
3,076,618	+		Pf6N2E2_2618	0.37	-0.7
3,076,618	+		Pf6N2E2_2618	0.37	-0.7