Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2358

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
2,791,322	-				-0.1
2,791,337	-				+0.3
2,791,337	-				-1.7
2,791,377	-				-1.5
2,791,377	-				-1.3
2,791,419	+				-0.3
2,791,420	-				-0.7
2,791,420	-				-0.2
2,791,420	-				+0.3
2,791,420	-				-2.4
2,791,420	-				+0.7
2,791,420	-				-0.7
2,791,420	-				+0.3
2,791,420	-				-0.5
2,791,420	-				-0.0
2,791,420	-				+0.9
2,791,482	+				+0.3
2,791,482	+				-1.3
2,791,608	-				-1.0
2,791,625	+				+0.3
2,791,686	+				+0.3
2,791,728	+				+0.3
2,791,728	+				+0.2
2,791,729	-				-0.1
2,791,736	+				+0.3
2,791,751	+				-1.2
2,791,752	-				-0.4
2,791,752	-				+0.3
2,791,930	-				-1.2
2,791,930	-				+0.3
2,792,014	+				-0.7
2,792,015	-				-0.7
2,792,015	-				-0.7
2,792,015	-				-0.6
2,792,015	-				-0.7
2,792,015	-				-0.7
2,792,056	+				+0.3
2,792,077	+				+0.3
2,792,077	+				+0.3
2,792,077	+				-0.7
2,792,078	-				+0.3
2,792,078	-				-1.3
2,792,078	-				-0.7
2,792,220	+				-0.7
2,792,221	-				-0.7
2,792,296	-		Pf6N2E2_2358	0.16	+0.3
2,792,345	+		Pf6N2E2_2358	0.20	+0.3
2,792,345	+		Pf6N2E2_2358	0.20	+0.3
2,792,468	-		Pf6N2E2_2358	0.31	+0.3
2,792,504	-		Pf6N2E2_2358	0.35	+0.3
2,792,542	+		Pf6N2E2_2358	0.38	-1.3
2,792,543	-		Pf6N2E2_2358	0.38	+0.3
2,792,543	-		Pf6N2E2_2358	0.38	+0.3
2,792,559	-		Pf6N2E2_2358	0.40	-0.7
2,792,630	-		Pf6N2E2_2358	0.46	+0.4
2,792,633	+		Pf6N2E2_2358	0.46	-0.7
2,792,634	-		Pf6N2E2_2358	0.46	+0.3
2,792,664	+		Pf6N2E2_2358	0.49	-0.4
2,792,664	+		Pf6N2E2_2358	0.49	+0.7
2,792,664	+		Pf6N2E2_2358	0.49	+0.3
2,792,664	+		Pf6N2E2_2358	0.49	-0.2
2,792,664	+		Pf6N2E2_2358	0.49	+0.3
2,792,665	-		Pf6N2E2_2358	0.49	+0.3
2,792,665	-		Pf6N2E2_2358	0.49	+0.3
2,792,665	-		Pf6N2E2_2358	0.49	-1.3
2,792,665	-		Pf6N2E2_2358	0.49	-0.7
2,792,665	-		Pf6N2E2_2358	0.49	+0.3
2,792,665	-		Pf6N2E2_2358	0.49	+0.3
2,792,698	-		Pf6N2E2_2358	0.52	+2.3
2,793,126	-				+0.3
2,793,126	-				+0.3
2,793,204	-				-0.6
2,793,410	-		Pf6N2E2_2359	0.16	+0.3
2,793,561	+		Pf6N2E2_2359	0.29	-0.7
2,793,667	+		Pf6N2E2_2359	0.39	-0.7
2,793,667	+		Pf6N2E2_2359	0.39	+0.3
2,793,667	+		Pf6N2E2_2359	0.39	-1.7
2,793,667	+		Pf6N2E2_2359	0.39	-0.7
2,793,668	-		Pf6N2E2_2359	0.39	+0.3
2,793,668	-		Pf6N2E2_2359	0.39	+0.3
2,793,934	+		Pf6N2E2_2359	0.63	+0.3
2,793,934	+		Pf6N2E2_2359	0.63	+0.9
2,793,934	+		Pf6N2E2_2359	0.63	-1.7
2,794,112	+				-0.7
2,794,115	+		Pf6N2E2_2359	0.79	+0.3
2,794,115	+		Pf6N2E2_2359	0.79	+0.3
2,794,115	+		Pf6N2E2_2359	0.79	-0.8
2,794,115	+		Pf6N2E2_2359	0.79	-0.9
2,794,116	-		Pf6N2E2_2359	0.79	+0.3
2,794,116	-		Pf6N2E2_2359	0.79	+0.3