Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1828

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
2,163,633	+		Pf6N2E2_1827	0.42	+0.2
2,163,633	+		Pf6N2E2_1827	0.42	-0.6
2,163,633	+		Pf6N2E2_1827	0.42	-0.1
2,163,633	+		Pf6N2E2_1827	0.42	+0.2
2,163,634	-		Pf6N2E2_1827	0.42	-0.8
2,163,702	-		Pf6N2E2_1827	0.47	+0.2
2,163,765	+		Pf6N2E2_1827	0.50	-0.3
2,163,765	+		Pf6N2E2_1827	0.50	+0.2
2,163,766	-		Pf6N2E2_1827	0.50	+0.2
2,163,843	-		Pf6N2E2_1827	0.55	+0.2
2,163,890	-		Pf6N2E2_1827	0.58	-0.8
2,163,957	-		Pf6N2E2_1827	0.62	+0.2
2,163,975	+		Pf6N2E2_1827	0.63	-0.5
2,164,013	-		Pf6N2E2_1827	0.65	+0.2
2,164,034	+		Pf6N2E2_1827	0.66	+0.2
2,164,068	+		Pf6N2E2_1827	0.68	-1.0
2,164,068	+		Pf6N2E2_1827	0.68	+0.2
2,164,115	+		Pf6N2E2_1827	0.71	+1.2
2,164,116	-		Pf6N2E2_1827	0.71	+0.2
2,164,123	-		Pf6N2E2_1827	0.72	-0.2
2,164,389	-		Pf6N2E2_1827	0.87	-1.4
2,164,407	+		Pf6N2E2_1827	0.89	+0.2
2,164,408	-		Pf6N2E2_1827	0.89	-0.8
2,164,466	-				+0.2
2,164,648	-				+0.2
2,164,648	-				+0.2
2,164,719	-				+0.2
2,164,720	+				-0.8
2,164,720	+				+0.2
2,164,721	-				-0.6
2,164,774	+		Pf6N2E2_1828	0.11	-1.8
2,164,835	-		Pf6N2E2_1828	0.15	-0.8
2,164,925	-		Pf6N2E2_1828	0.21	+0.2
2,164,925	-		Pf6N2E2_1828	0.21	+0.2
2,164,928	+		Pf6N2E2_1828	0.22	+0.2
2,164,929	-		Pf6N2E2_1828	0.22	-0.8
2,164,973	-		Pf6N2E2_1828	0.25	+0.2
2,164,993	+		Pf6N2E2_1828	0.26	+0.2
2,164,994	-		Pf6N2E2_1828	0.26	-0.8
2,164,994	-		Pf6N2E2_1828	0.26	+0.2
2,165,128	-		Pf6N2E2_1828	0.36	+0.2
2,165,241	+		Pf6N2E2_1828	0.44	+0.2
2,165,241	+		Pf6N2E2_1828	0.44	+0.2
2,165,241	+		Pf6N2E2_1828	0.44	+0.2
2,165,242	-		Pf6N2E2_1828	0.44	+0.2
2,165,242	-		Pf6N2E2_1828	0.44	-0.8
2,165,242	-		Pf6N2E2_1828	0.44	+0.2
2,165,242	-		Pf6N2E2_1828	0.44	-0.2
2,165,245	+		Pf6N2E2_1828	0.44	+0.2
2,165,245	+		Pf6N2E2_1828	0.44	+0.2
2,165,245	+		Pf6N2E2_1828	0.44	-0.8
2,165,246	-		Pf6N2E2_1828	0.44	-0.8
2,165,246	-		Pf6N2E2_1828	0.44	+0.2
2,165,246	-		Pf6N2E2_1828	0.44	-0.3
2,165,261	+		Pf6N2E2_1828	0.46	-0.8
2,165,262	-		Pf6N2E2_1828	0.46	+0.2
2,165,262	-		Pf6N2E2_1828	0.46	+0.2
2,165,262	-		Pf6N2E2_1828	0.46	-1.4
2,165,287	-		Pf6N2E2_1828	0.47	+0.2
2,165,358	+		Pf6N2E2_1828	0.52	-0.2
2,165,391	-		Pf6N2E2_1828	0.55	+0.2
2,165,419	+		Pf6N2E2_1828	0.57	+0.2
2,165,419	+		Pf6N2E2_1828	0.57	-0.3
2,165,419	+		Pf6N2E2_1828	0.57	+0.4
2,165,423	-		Pf6N2E2_1828	0.57	-1.8
2,165,423	-		Pf6N2E2_1828	0.57	-1.0
2,165,473	-		Pf6N2E2_1828	0.61	+0.4
2,165,532	+		Pf6N2E2_1828	0.65	+0.2
2,165,532	+		Pf6N2E2_1828	0.65	+0.2
2,165,533	-		Pf6N2E2_1828	0.65	+0.2
2,165,533	-		Pf6N2E2_1828	0.65	+0.2
2,165,533	-		Pf6N2E2_1828	0.65	+0.2
2,165,533	-		Pf6N2E2_1828	0.65	-0.8
2,165,591	-		Pf6N2E2_1828	0.69	+0.2
2,165,591	-		Pf6N2E2_1828	0.69	+0.2
2,165,632	+		Pf6N2E2_1828	0.72	+0.2
2,165,704	+		Pf6N2E2_1828	0.77	-0.8
2,165,704	+		Pf6N2E2_1828	0.77	+1.2
2,165,704	+		Pf6N2E2_1828	0.77	+0.2
2,165,705	-		Pf6N2E2_1828	0.77	-0.8
2,165,706	+		Pf6N2E2_1828	0.77	+0.2
2,165,706	+		Pf6N2E2_1828	0.77	+0.2
2,165,707	-		Pf6N2E2_1828	0.77	+0.2
2,165,716	-		Pf6N2E2_1828	0.78	-1.4
2,165,799	-		Pf6N2E2_1828	0.84	+0.2
2,165,800	+		Pf6N2E2_1828	0.84	+0.2
2,165,801	-		Pf6N2E2_1828	0.84	-0.8
2,165,828	-		Pf6N2E2_1828	0.86	+0.2
2,165,871	-		Pf6N2E2_1828	0.89	+0.2
2,165,871	-		Pf6N2E2_1828	0.89	+0.2
2,165,873	-		Pf6N2E2_1828	0.89	-1.4
2,165,931	-				+0.2
2,165,933	+				+0.2
2,165,990	-				-0.8
2,166,020	+				+0.2
2,166,020	+				+0.2
2,166,021	-				-1.1
2,166,038	-				+0.2
2,166,054	+				-0.8
2,166,055	-				+0.2
2,166,081	-				+0.2
2,166,106	+				+0.2
2,166,107	-				+0.2
2,166,202	-				-0.3
2,166,341	-				+0.2
2,166,341	-				-1.4
2,166,412	+				+0.2
2,166,464	+				-0.8
2,166,464	+				+0.2
2,166,464	+				-1.4
2,166,464	+				+0.2
2,166,464	+				+0.2
2,166,464	+				-0.9
2,166,464	+				+0.2
2,166,465	-				-1.8
2,166,465	-				+0.2
2,166,468	+				-0.8
2,166,468	+				-0.6
2,166,502	-				+0.2
2,166,669	-		Pf6N2E2_1829	0.14	+0.2
2,166,804	-		Pf6N2E2_1829	0.25	+0.2
2,166,902	+		Pf6N2E2_1829	0.33	+0.2
2,166,902	+		Pf6N2E2_1829	0.33	-1.8
2,166,903	-		Pf6N2E2_1829	0.33	-0.8
2,166,903	-		Pf6N2E2_1829	0.33	-1.4
2,166,903	-		Pf6N2E2_1829	0.33	+0.2
2,166,903	-		Pf6N2E2_1829	0.33	-0.8
2,166,938	-		Pf6N2E2_1829	0.36	-0.8