Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1391

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,631,230	+				+0.1
1,631,443	-				-0.9
1,632,023	-				+0.1
1,632,191	+				+0.1
1,632,461	+		Pf6N2E2_1391	0.42	-1.5
1,632,461	+		Pf6N2E2_1391	0.42	+0.1
1,632,461	+		Pf6N2E2_1391	0.42	+0.1
1,632,461	+		Pf6N2E2_1391	0.42	-1.5
1,632,783	-				+0.1
1,632,845	+				+0.1
1,632,845	+				-0.9
1,632,845	+				-0.6
1,632,846	-				+0.1
1,633,087	+		Pf6N2E2_1392	0.33	-0.8
1,633,088	-		Pf6N2E2_1392	0.33	+0.1
1,633,088	-		Pf6N2E2_1392	0.33	+0.5
1,633,213	+		Pf6N2E2_1392	0.49	+0.1
1,633,372	+		Pf6N2E2_1392	0.69	+0.1
1,633,372	+		Pf6N2E2_1392	0.69	+0.1
1,633,373	-		Pf6N2E2_1392	0.69	-0.9
1,633,676	+		Pf6N2E2_1393	0.16	+1.7
1,633,676	+		Pf6N2E2_1393	0.16	-0.3
1,633,676	+		Pf6N2E2_1393	0.16	+1.7
1,633,676	+		Pf6N2E2_1393	0.16	+0.1
1,633,676	+		Pf6N2E2_1393	0.16	+0.1
1,633,677	-		Pf6N2E2_1393	0.16	+0.1
1,633,677	-		Pf6N2E2_1393	0.16	-0.9
1,633,677	-		Pf6N2E2_1393	0.16	-0.0
1,633,677	-		Pf6N2E2_1393	0.16	-0.9
1,633,677	-		Pf6N2E2_1393	0.16	+1.7
1,633,677	-		Pf6N2E2_1393	0.16	-1.5