Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1148

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,344,433	-				+0.1
1,344,433	-				-1.5
1,344,433	-				-0.9
1,344,660	+		Pf6N2E2_1147	0.30	-0.6
1,344,661	-		Pf6N2E2_1147	0.30	+1.1
1,345,031	+		Pf6N2E2_1147	0.78	+0.1
1,345,032	-				+0.1
1,345,193	+				-0.9
1,345,193	+				+0.1
1,345,193	+				+0.1
1,345,194	-				+0.1
1,345,197	+				-0.5
1,345,197	+				-0.9
1,345,197	+				-0.3
1,345,197	+				+0.1
1,345,198	-				+0.1
1,345,423	+				-0.3
1,345,423	+				+0.1
1,345,424	-				-0.9
1,345,441	+				-0.6
1,345,476	+				+0.1
1,345,477	-				-0.9
1,345,495	+				-1.2
1,345,495	+				+0.1
1,345,495	+				-0.3
1,345,496	-				+0.1
1,345,496	-				+0.2
1,345,496	-				+0.4
1,345,522	+				-0.3
1,345,525	+				-0.9
1,345,526	-				-0.9
1,345,526	-				+0.1
1,345,789	+		Pf6N2E2_1148	0.31	+0.1
1,346,012	+		Pf6N2E2_1148	0.50	+0.1
1,346,392	+		Pf6N2E2_1148	0.83	+0.1
1,346,393	-		Pf6N2E2_1148	0.84	+0.1
1,346,393	-		Pf6N2E2_1148	0.84	-2.9
1,346,393	-		Pf6N2E2_1148	0.84	-0.9
1,346,396	+		Pf6N2E2_1148	0.84	-0.9
1,346,418	+		Pf6N2E2_1148	0.86	+0.1
1,346,703	+		Pf6N2E2_1149	0.11	-0.9
1,346,703	+		Pf6N2E2_1149	0.11	-0.9
1,346,704	-		Pf6N2E2_1149	0.11	-0.9
1,346,704	-		Pf6N2E2_1149	0.11	+0.4
1,346,862	+		Pf6N2E2_1149	0.25	+0.1
1,346,863	-		Pf6N2E2_1149	0.25	-0.9
1,347,038	+		Pf6N2E2_1149	0.41	-0.7
1,347,038	+		Pf6N2E2_1149	0.41	-0.3
1,347,121	+		Pf6N2E2_1149	0.48	+0.1
1,347,121	+		Pf6N2E2_1149	0.48	-0.4
1,347,122	-		Pf6N2E2_1149	0.48	-0.5
1,347,122	-		Pf6N2E2_1149	0.48	+0.1
1,347,122	-		Pf6N2E2_1149	0.48	+2.1
1,347,122	-		Pf6N2E2_1149	0.48	+0.1
1,347,122	-		Pf6N2E2_1149	0.48	+0.1
1,347,166	+		Pf6N2E2_1149	0.52	-1.5
1,347,166	+		Pf6N2E2_1149	0.52	+0.1
1,347,167	-		Pf6N2E2_1149	0.52	-0.9
1,347,167	-		Pf6N2E2_1149	0.52	+0.1
1,347,202	+		Pf6N2E2_1149	0.56	+0.1
1,347,436	+		Pf6N2E2_1149	0.77	+0.1
1,347,437	-		Pf6N2E2_1149	0.77	+0.1