Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6000

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,816,100	+		Pf6N2E2_5999	0.49	+0.4
6,816,258	-		Pf6N2E2_5999	0.62	-1.3
6,816,258	-		Pf6N2E2_5999	0.62	+0.4
6,816,258	-		Pf6N2E2_5999	0.62	-0.6
6,816,258	-		Pf6N2E2_5999	0.62	-1.2
6,816,259	+		Pf6N2E2_5999	0.62	+0.4
6,816,260	-		Pf6N2E2_5999	0.62	+0.4
6,816,643	+				-0.6
6,816,868	+				-0.1
6,816,869	-				-1.7
6,816,869	-				+0.4
6,816,869	-				-0.9
6,817,056	+		Pf6N2E2_6000	0.13	-0.4
6,817,347	+		Pf6N2E2_6000	0.27	+0.0
6,817,601	-		Pf6N2E2_6000	0.39	+0.4
6,817,711	+		Pf6N2E2_6000	0.44	-0.6
6,817,712	-		Pf6N2E2_6000	0.44	-0.6
6,817,712	-		Pf6N2E2_6000	0.44	-0.6
6,817,768	+		Pf6N2E2_6000	0.46	+0.4
6,817,769	-		Pf6N2E2_6000	0.46	+0.4
6,817,769	-		Pf6N2E2_6000	0.46	-1.2
6,817,769	-		Pf6N2E2_6000	0.46	-1.4
6,817,769	-		Pf6N2E2_6000	0.46	-0.2
6,817,769	-		Pf6N2E2_6000	0.46	+0.1
6,817,800	-		Pf6N2E2_6000	0.48	-1.6
6,818,298	+		Pf6N2E2_6000	0.71	-1.0
6,818,299	-		Pf6N2E2_6000	0.71	+0.4
6,818,299	-		Pf6N2E2_6000	0.71	+0.4
6,818,525	-		Pf6N2E2_6000	0.82	+0.4
6,818,525	-		Pf6N2E2_6000	0.82	-0.9
6,818,560	+		Pf6N2E2_6000	0.83	-0.6
6,818,560	+		Pf6N2E2_6000	0.83	-0.7
6,818,560	+		Pf6N2E2_6000	0.83	-0.6
6,818,561	-		Pf6N2E2_6000	0.83	+0.4
6,818,587	+		Pf6N2E2_6000	0.85	-0.2
6,818,588	-		Pf6N2E2_6000	0.85	-0.6
6,818,588	-		Pf6N2E2_6000	0.85	+0.4
6,818,588	-		Pf6N2E2_6000	0.85	-0.6
6,818,588	-		Pf6N2E2_6000	0.85	-0.5
6,818,699	+		Pf6N2E2_6000	0.90	-0.5
6,818,836	+				-0.6
6,818,978	-				-0.4
6,818,998	+				+0.4
6,819,005	+				+0.4
6,819,005	+				+0.4
6,819,006	-				+0.4
6,819,006	-				-1.2
6,819,013	+				+0.4
6,819,135	+		Pf6N2E2_6001	0.18	-1.2
6,819,135	+		Pf6N2E2_6001	0.18	-0.5
6,819,135	+		Pf6N2E2_6001	0.18	+0.4
6,819,135	+		Pf6N2E2_6001	0.18	-1.2
6,819,136	-		Pf6N2E2_6001	0.18	+0.4
6,819,136	-		Pf6N2E2_6001	0.18	+0.4
6,819,186	+		Pf6N2E2_6001	0.24	-0.6
6,819,186	+		Pf6N2E2_6001	0.24	+0.4
6,819,252	+		Pf6N2E2_6001	0.33	-0.6
6,819,252	+		Pf6N2E2_6001	0.33	+0.4
6,819,252	+		Pf6N2E2_6001	0.33	+0.4
6,819,253	-		Pf6N2E2_6001	0.34	+0.4
6,819,523	-		Pf6N2E2_6001	0.70	+0.4
6,819,580	-		Pf6N2E2_6001	0.78	-1.2
6,819,580	-		Pf6N2E2_6001	0.78	+0.4
6,819,630	+		Pf6N2E2_6001	0.85	-0.2
6,819,630	+		Pf6N2E2_6001	0.85	-1.2
6,819,630	+		Pf6N2E2_6001	0.85	-0.4
6,819,630	+		Pf6N2E2_6001	0.85	-0.6
6,819,630	+		Pf6N2E2_6001	0.85	+0.4
6,819,630	+		Pf6N2E2_6001	0.85	+0.4
6,819,630	+		Pf6N2E2_6001	0.85	-0.6
6,819,630	+		Pf6N2E2_6001	0.85	-1.1
6,819,631	-		Pf6N2E2_6001	0.85	-0.6
6,819,631	-		Pf6N2E2_6001	0.85	+0.4
6,819,631	-		Pf6N2E2_6001	0.85	+0.4
6,819,631	-		Pf6N2E2_6001	0.85	-0.3
6,819,633	-		Pf6N2E2_6001	0.85	-1.2
6,819,675	-				+0.4
6,819,675	-				-1.2
6,819,873	+				+0.4
6,819,873	+				+0.4
6,819,874	-				-0.6