Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5807

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,622,582	-		Pf6N2E2_5805	0.38	-0.8
6,622,599	+		Pf6N2E2_5805	0.40	+0.4
6,622,600	-		Pf6N2E2_5805	0.40	+0.4
6,622,600	-		Pf6N2E2_5805	0.40	+0.4
6,622,600	-		Pf6N2E2_5805	0.40	+0.4
6,622,600	-		Pf6N2E2_5805	0.40	-0.6
6,622,615	-		Pf6N2E2_5805	0.42	-0.6
6,622,615	-		Pf6N2E2_5805	0.42	-0.6
6,622,674	+		Pf6N2E2_5805	0.48	-0.1
6,622,761	+		Pf6N2E2_5805	0.57	+0.4
6,622,761	+		Pf6N2E2_5805	0.57	+0.4
6,622,761	+		Pf6N2E2_5805	0.57	+0.4
6,622,761	+		Pf6N2E2_5805	0.57	-1.2
6,622,761	+		Pf6N2E2_5805	0.57	-0.6
6,622,761	+		Pf6N2E2_5805	0.57	-0.6
6,622,761	+		Pf6N2E2_5805	0.57	+0.4
6,622,761	+		Pf6N2E2_5805	0.57	+0.4
6,622,761	+		Pf6N2E2_5805	0.57	+0.4
6,622,762	-		Pf6N2E2_5805	0.57	-0.6
6,622,762	-		Pf6N2E2_5805	0.57	+0.4
6,622,762	-		Pf6N2E2_5805	0.57	+0.4
6,622,762	-		Pf6N2E2_5805	0.57	+0.4
6,622,762	-		Pf6N2E2_5805	0.57	+0.4
6,623,218	+				+0.4
6,623,218	+				-2.6
6,623,218	+				+0.4
6,623,219	-				+0.4
6,623,272	-		Pf6N2E2_5806	0.35	-0.6
6,623,316	-		Pf6N2E2_5806	0.60	+0.4
6,623,316	-		Pf6N2E2_5806	0.60	+0.4
6,623,348	-		Pf6N2E2_5806	0.78	+1.1
6,623,367	+		Pf6N2E2_5806	0.89	+0.4
6,623,384	+				+0.4
6,623,428	-				+0.4
6,623,592	+				-0.6
6,623,592	+				+0.4
6,623,593	-				+0.4
6,623,650	+		Pf6N2E2_5807	0.20	-1.2
6,623,740	-		Pf6N2E2_5807	0.46	-0.8
6,623,743	+		Pf6N2E2_5807	0.47	-0.6
6,623,743	+		Pf6N2E2_5807	0.47	-0.6
6,623,743	+		Pf6N2E2_5807	0.47	-0.6
6,623,744	-		Pf6N2E2_5807	0.47	+0.4
6,623,759	-		Pf6N2E2_5807	0.51	+0.4
6,623,786	-		Pf6N2E2_5807	0.59	+0.4
6,623,875	+		Pf6N2E2_5807	0.84	-1.2
6,623,876	-		Pf6N2E2_5807	0.84	-0.6
6,623,902	+				-1.4
6,623,903	-				+0.4
6,623,909	-				+0.4
6,623,917	+				+0.4
6,623,917	+				-0.6
6,623,918	-				-1.2
6,623,918	-				+0.4
6,623,918	-				-0.8
6,623,918	-				-0.6
6,624,025	+				-0.2
6,624,029	+				-0.9
6,624,030	-				+0.4
6,624,030	-				-1.4
6,624,030	-				+0.1
6,624,192	+		Pf6N2E2_5808	0.10	+0.4
6,624,193	-		Pf6N2E2_5808	0.10	+0.4
6,624,193	-		Pf6N2E2_5808	0.10	-0.6
6,624,206	+		Pf6N2E2_5808	0.11	+0.4
6,624,207	-		Pf6N2E2_5808	0.11	+0.4
6,624,207	-		Pf6N2E2_5808	0.11	-1.2
6,624,259	+		Pf6N2E2_5808	0.15	-1.0
6,624,260	-		Pf6N2E2_5808	0.15	+0.4
6,624,260	-		Pf6N2E2_5808	0.15	+0.4
6,624,260	-		Pf6N2E2_5808	0.15	-1.6
6,624,260	-		Pf6N2E2_5808	0.15	-0.6
6,624,260	-		Pf6N2E2_5808	0.15	-0.6
6,624,287	-		Pf6N2E2_5808	0.16	+0.4
6,624,287	-		Pf6N2E2_5808	0.16	-0.6
6,624,303	+		Pf6N2E2_5808	0.17	-0.5
6,624,303	+		Pf6N2E2_5808	0.17	-1.9
6,624,303	+		Pf6N2E2_5808	0.17	-0.6
6,624,303	+		Pf6N2E2_5808	0.17	+0.4
6,624,304	-		Pf6N2E2_5808	0.17	-0.2
6,624,304	-		Pf6N2E2_5808	0.17	+0.4
6,624,304	-		Pf6N2E2_5808	0.17	+0.4
6,624,304	-		Pf6N2E2_5808	0.17	+0.4
6,624,304	-		Pf6N2E2_5808	0.17	-0.7
6,624,304	-		Pf6N2E2_5808	0.17	+0.4
6,624,304	-				-1.4
6,624,304	-		Pf6N2E2_5808	0.17	-1.2
6,624,308	+		Pf6N2E2_5808	0.18	+0.4
6,624,309	-		Pf6N2E2_5808	0.18	+0.4
6,624,309	-		Pf6N2E2_5808	0.18	-0.7
6,624,360	+		Pf6N2E2_5808	0.21	+2.0
6,624,386	+		Pf6N2E2_5808	0.23	-0.6
6,624,386	+		Pf6N2E2_5808	0.23	-0.6
6,624,386	+		Pf6N2E2_5808	0.23	-0.6
6,624,386	+		Pf6N2E2_5808	0.23	+0.4
6,624,386	+		Pf6N2E2_5808	0.23	+1.0
6,624,387	-		Pf6N2E2_5808	0.23	-0.6
6,624,387	-		Pf6N2E2_5808	0.23	-0.6
6,624,387	-		Pf6N2E2_5808	0.23	-0.6
6,624,719	+		Pf6N2E2_5808	0.43	-0.6
6,624,720	-		Pf6N2E2_5808	0.44	-0.6
6,624,720	-		Pf6N2E2_5808	0.44	-1.2
6,624,816	+		Pf6N2E2_5808	0.50	+0.4
6,624,817	-		Pf6N2E2_5808	0.50	+0.4
6,624,817	-		Pf6N2E2_5808	0.50	-0.6
6,624,817	-		Pf6N2E2_5808	0.50	+0.4
6,624,851	+		Pf6N2E2_5808	0.52	+0.4
6,624,852	-		Pf6N2E2_5808	0.52	+0.4
6,624,852	-		Pf6N2E2_5808	0.52	-1.0
6,624,878	+		Pf6N2E2_5808	0.53	-0.6
6,624,924	-		Pf6N2E2_5808	0.56	+0.4
6,624,924	-		Pf6N2E2_5808	0.56	+0.1
6,624,924	-		Pf6N2E2_5808	0.56	+0.4
6,624,924	-		Pf6N2E2_5808	0.56	-1.9