Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5688

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,502,079	+		Pf6N2E2_5687	0.45	-0.6
6,502,079	+		Pf6N2E2_5687	0.45	+0.4
6,502,116	+		Pf6N2E2_5687	0.48	+0.4
6,502,117	-		Pf6N2E2_5687	0.48	+0.4
6,502,117	-		Pf6N2E2_5687	0.48	-0.6
6,502,134	+		Pf6N2E2_5687	0.49	-0.4
6,502,134	+		Pf6N2E2_5687	0.49	+0.4
6,502,135	-		Pf6N2E2_5687	0.49	+0.4
6,502,135	-		Pf6N2E2_5687	0.49	-0.6
6,502,135	-		Pf6N2E2_5687	0.49	+0.4
6,502,135	-		Pf6N2E2_5687	0.49	+0.4
6,502,135	-		Pf6N2E2_5687	0.49	-0.6
6,502,135	-		Pf6N2E2_5687	0.49	+0.4
6,502,135	-		Pf6N2E2_5687	0.49	-0.6
6,502,461	+		Pf6N2E2_5687	0.73	-1.1
6,502,461	+		Pf6N2E2_5687	0.73	+0.4
6,502,461	+		Pf6N2E2_5687	0.73	+0.4
6,502,461	+		Pf6N2E2_5687	0.73	-1.1
6,502,462	-				+0.4
6,502,462	-		Pf6N2E2_5687	0.73	-0.1
6,502,462	-		Pf6N2E2_5687	0.73	+0.4
6,502,462	-		Pf6N2E2_5687	0.73	-1.1
6,502,841	+				-0.6
6,502,909	+				-1.2
6,502,942	-				-0.6
6,502,942	-				+0.4
6,502,942	-				+0.4
6,502,994	+		Pf6N2E2_5688	0.13	-0.5
6,502,994	+		Pf6N2E2_5688	0.13	-0.6
6,502,995	-		Pf6N2E2_5688	0.13	-1.2
6,502,995	-		Pf6N2E2_5688	0.13	-0.6
6,503,097	+		Pf6N2E2_5688	0.27	+0.4
6,503,097	+		Pf6N2E2_5688	0.27	-0.6
6,503,097	+		Pf6N2E2_5688	0.27	+0.4
6,503,098	-		Pf6N2E2_5688	0.27	+0.4
6,503,186	+		Pf6N2E2_5688	0.39	-0.6
6,503,186	+		Pf6N2E2_5688	0.39	+0.4
6,503,186	+		Pf6N2E2_5688	0.39	-0.6
6,503,186	+		Pf6N2E2_5688	0.39	+0.4
6,503,187	-		Pf6N2E2_5688	0.39	-2.4
6,503,187	-		Pf6N2E2_5688	0.39	+0.4
6,503,226	-		Pf6N2E2_5688	0.44	+0.4
6,503,226	-		Pf6N2E2_5688	0.44	-0.9
6,503,278	-		Pf6N2E2_5688	0.51	-0.6
6,503,307	+		Pf6N2E2_5688	0.55	-0.4
6,503,490	+		Pf6N2E2_5688	0.80	-1.2
6,503,490	+		Pf6N2E2_5688	0.80	-0.6
6,503,491	-		Pf6N2E2_5688	0.80	+0.4
6,503,491	-		Pf6N2E2_5688	0.80	-1.2
6,503,491	-		Pf6N2E2_5688	0.80	-1.2
6,503,509	+		Pf6N2E2_5688	0.82	-1.2
6,503,509	+		Pf6N2E2_5688	0.82	+0.4
6,503,510	-		Pf6N2E2_5688	0.82	-1.0
6,503,665	+				+0.4
6,503,665	+				-0.8
6,503,665	+				+0.4
6,503,665	+				+0.4
6,503,666	-				+0.4
6,503,666	-				+0.4
6,503,666	-				+0.4
6,503,666	-				+0.9
6,503,666	-				+0.4
6,503,666	-				+0.4
6,503,700	-				+1.4
6,503,700	-				-1.0
6,503,712	+				+0.4
6,503,712	+				-0.6
6,503,712	+				+0.6
6,503,793	-		Pf6N2E2_5689	0.13	+0.3
6,503,917	+		Pf6N2E2_5689	0.39	+0.4
6,503,918	-		Pf6N2E2_5689	0.39	-1.4
6,503,918	-		Pf6N2E2_5689	0.39	+0.4
6,504,078	+		Pf6N2E2_5689	0.74	-1.1
6,504,079	-		Pf6N2E2_5689	0.74	-0.6
6,504,142	+		Pf6N2E2_5689	0.87	-2.1
6,504,184	+				+1.7
6,504,184	+				+0.4
6,504,184	+				+0.4
6,504,184	+				+0.4
6,504,219	-				+0.4
6,504,585	-				+0.4
6,504,638	+				-0.6
6,504,639	-				+0.4