Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5516

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,335,079	+				-1.2
6,335,219	+				-1.6
6,336,304	-		Pf6N2E2_5516	0.88	+0.4
6,336,447	+				-0.6
6,336,447	+				-1.2
6,336,448	-				+0.4
6,336,525	+				+0.4
6,336,526	-				+0.4
6,336,526	-				+0.4
6,336,526	-				-1.9
6,336,630	+		Pf6N2E2_5517	0.14	+0.4
6,336,631	-		Pf6N2E2_5517	0.14	+0.4
6,336,631	-		Pf6N2E2_5517	0.14	+0.4
6,336,631	-		Pf6N2E2_5517	0.14	+0.4
6,336,688	-		Pf6N2E2_5517	0.23	-0.6
6,336,688	-		Pf6N2E2_5517	0.23	-2.2
6,336,762	+		Pf6N2E2_5517	0.35	-1.2
6,337,002	+		Pf6N2E2_5517	0.73	+0.4
6,337,002	+		Pf6N2E2_5517	0.73	+0.4
6,337,003	-		Pf6N2E2_5517	0.73	+0.4
6,337,068	+		Pf6N2E2_5517	0.83	-1.9
6,337,068	+		Pf6N2E2_5517	0.83	-0.6
6,337,068	+		Pf6N2E2_5517	0.83	-1.2
6,337,068	+		Pf6N2E2_5517	0.83	-0.6
6,337,069	-		Pf6N2E2_5517	0.83	+0.4
6,337,069	-		Pf6N2E2_5517	0.83	-1.2
6,337,069	-		Pf6N2E2_5517	0.83	-0.6
6,337,069	-		Pf6N2E2_5517	0.83	-0.6
6,337,069	-		Pf6N2E2_5517	0.83	-1.9
6,337,101	+		Pf6N2E2_5517	0.88	+0.4
6,337,101	+		Pf6N2E2_5517	0.88	+0.4
6,337,102	-		Pf6N2E2_5517	0.88	-2.4
6,337,116	+				-2.2
6,337,394	+		Pf6N2E2_5518	0.22	-1.3