Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5493

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,310,888	-				+0.4
6,310,930	+				+0.4
6,310,930	+				+0.4
6,311,389	+		Pf6N2E2_5492	0.59	-0.8
6,311,389	+		Pf6N2E2_5492	0.59	-0.6
6,311,389	+		Pf6N2E2_5492	0.59	-0.5
6,311,390	-		Pf6N2E2_5492	0.59	-0.7
6,311,390	-		Pf6N2E2_5492	0.59	+0.4
6,311,509	-		Pf6N2E2_5492	0.72	-0.6
6,311,666	+		Pf6N2E2_5492	0.89	+0.4
6,311,666	+		Pf6N2E2_5492	0.89	+0.4
6,311,666	+		Pf6N2E2_5492	0.89	-0.5
6,311,666	+		Pf6N2E2_5492	0.89	+0.4
6,311,667	-		Pf6N2E2_5492	0.89	-0.8
6,311,713	+				+0.4
6,311,713	+				+0.4
6,311,714	-				+0.4
6,311,714	-				-0.6
6,311,894	+		Pf6N2E2_5493	0.12	-1.2
6,311,894	+		Pf6N2E2_5493	0.12	-0.6
6,311,894	+		Pf6N2E2_5493	0.12	+0.4
6,311,894	+		Pf6N2E2_5493	0.12	+0.4
6,311,894	+		Pf6N2E2_5493	0.12	+0.4
6,311,894	+		Pf6N2E2_5493	0.12	-1.6
6,311,894	+		Pf6N2E2_5493	0.12	-0.6
6,311,894	+		Pf6N2E2_5493	0.12	+0.4
6,311,894	+		Pf6N2E2_5493	0.12	-0.6
6,311,895	-		Pf6N2E2_5493	0.13	-0.6
6,311,895	-		Pf6N2E2_5493	0.13	+0.4
6,311,895	-		Pf6N2E2_5493	0.13	+0.4
6,311,895	-		Pf6N2E2_5493	0.13	+0.4
6,311,895	-		Pf6N2E2_5493	0.13	+0.4
6,311,895	-		Pf6N2E2_5493	0.13	-0.6
6,312,152	+		Pf6N2E2_5493	0.47	-0.4
6,312,152	+		Pf6N2E2_5493	0.47	-0.6
6,312,152	+		Pf6N2E2_5493	0.47	-0.6
6,312,152	+		Pf6N2E2_5493	0.47	-1.6
6,312,153	-		Pf6N2E2_5493	0.47	+0.4
6,312,153	-		Pf6N2E2_5493	0.47	-0.6
6,312,412	+		Pf6N2E2_5493	0.81	+0.4
6,312,413	-		Pf6N2E2_5493	0.82	-1.9
6,312,413	-		Pf6N2E2_5493	0.82	-0.6
6,312,535	+				-0.8
6,312,548	+				-1.2
6,312,548	+				-0.6
6,312,548	+				-1.2
6,312,549	-				-1.9
6,312,549	-				-0.6
6,312,576	+				-1.2
6,312,576	+				+0.4
6,312,576	+				+0.4
6,312,576	+				-0.8
6,312,713	+				+0.4
6,312,713	+				+0.4
6,312,714	-				+0.4
6,312,896	+		Pf6N2E2_5494	0.17	+0.4
6,312,896	+		Pf6N2E2_5494	0.17	+0.4
6,312,897	-		Pf6N2E2_5494	0.17	+0.4
6,312,897	-		Pf6N2E2_5494	0.17	-1.9
6,312,998	+		Pf6N2E2_5494	0.24	+0.4
6,312,998	+		Pf6N2E2_5494	0.24	-1.9
6,312,999	-		Pf6N2E2_5494	0.24	+0.4
6,312,999	-		Pf6N2E2_5494	0.24	-1.2
6,313,178	+		Pf6N2E2_5494	0.36	+0.4
6,313,198	+		Pf6N2E2_5494	0.38	-0.5
6,313,494	-		Pf6N2E2_5494	0.58	-1.2
6,313,536	-		Pf6N2E2_5494	0.61	+0.4