Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5433

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,240,806	+				+0.4
6,240,806	+				-0.6
6,240,806	+				+0.4
6,240,806	+				+0.4
6,240,807	-				-1.7
6,240,807	-				+0.4
6,240,816	+				+1.4
6,240,816	+				-1.2
6,240,872	-		Pf6N2E2_5433	0.19	-2.7
6,240,872	-		Pf6N2E2_5433	0.19	+0.4
6,240,903	+		Pf6N2E2_5433	0.29	+0.4
6,240,903	+		Pf6N2E2_5433	0.29	+0.4
6,240,903	+		Pf6N2E2_5433	0.29	+0.4
6,240,903	+		Pf6N2E2_5433	0.29	-1.7
6,240,903	+		Pf6N2E2_5433	0.29	-0.6
6,240,904	-		Pf6N2E2_5433	0.29	+0.4
6,241,080	+		Pf6N2E2_5433	0.86	-0.6
6,241,081	-		Pf6N2E2_5433	0.86	+0.4
6,241,095	+				+0.4
6,241,095	+				-1.2
6,241,095	+				+0.4
6,241,095	+				+0.4
6,241,096	-				+0.4
6,241,174	-				-0.2
6,241,184	-				-0.7
6,241,184	-				-0.6
6,241,206	+				+0.4
6,241,206	+				+0.4
6,241,206	+				-0.6
6,241,207	-				+0.4
6,241,295	+				+0.4
6,241,295	+				+0.4
6,241,296	-				-0.8
6,241,348	-				-1.9
6,241,348	-				-0.6
6,241,387	+				+0.4
6,241,388	-				-1.6
6,241,415	+				-0.6
6,241,416	-				-0.9
6,241,652	+				+0.4
6,241,653	-				-1.6
6,241,653	-				+0.0
6,241,653	-				-0.6
6,241,653	-				+0.4
6,241,656	+				-1.2
6,241,656	+				-1.2
6,241,656	+				+0.4
6,241,656	+				-0.6
6,241,656	+				-0.3
6,241,656	+				-0.5
6,241,656	+				+0.4
6,241,657	-				+0.4
6,241,657	-				+0.4
6,241,657	-				+0.4
6,241,657	-				-0.6
6,241,657	-				+0.4
6,241,657	-				+0.4
6,241,657	-				-1.9
6,241,657	-				+0.4
6,241,657	-				-0.6
6,241,657	-				-0.6
6,241,657	-				-0.7
6,241,657	-				-0.8
6,241,657	-				+0.4
6,241,754	+				-0.6
6,241,754	+				+0.4
6,241,754	+				+0.4
6,241,755	-				+0.4
6,241,755	-				-1.4
6,241,786	-		Pf6N2E2_5434	0.12	-1.3
6,241,810	+		Pf6N2E2_5434	0.14	-0.7
6,241,810	+		Pf6N2E2_5434	0.14	+0.4
6,241,811	-		Pf6N2E2_5434	0.14	+0.4
6,241,814	+		Pf6N2E2_5434	0.15	-0.6
6,241,854	+		Pf6N2E2_5434	0.18	-0.6
6,241,854	+		Pf6N2E2_5434	0.18	-1.6
6,241,854	+		Pf6N2E2_5434	0.18	+0.4
6,241,855	-		Pf6N2E2_5434	0.18	+0.4
6,241,855	-		Pf6N2E2_5434	0.18	-0.8
6,241,855	-		Pf6N2E2_5434	0.18	+0.4
6,241,855	-		Pf6N2E2_5434	0.18	-1.2
6,241,855	-		Pf6N2E2_5434	0.18	+0.1
6,241,856	+		Pf6N2E2_5434	0.19	+0.4
6,241,856	+		Pf6N2E2_5434	0.19	+0.4
6,241,857	-		Pf6N2E2_5434	0.19	-0.6
6,241,857	-		Pf6N2E2_5434	0.19	-0.1
6,241,857	-		Pf6N2E2_5434	0.19	+0.4
6,241,907	-		Pf6N2E2_5434	0.23	-0.6
6,241,908	+		Pf6N2E2_5434	0.23	+0.4
6,241,908	+		Pf6N2E2_5434	0.23	-1.6
6,241,923	-		Pf6N2E2_5434	0.25	+0.4
6,242,012	-		Pf6N2E2_5434	0.33	+0.4
6,242,012	-		Pf6N2E2_5434	0.33	-1.0
6,242,048	-		Pf6N2E2_5434	0.36	+0.4