Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5339

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,132,864	+		Pf6N2E2_5338	0.18	-5.1
6,132,864	+		Pf6N2E2_5338	0.18	-4.3
6,132,864	+		Pf6N2E2_5338	0.18	-6.6
6,132,864	+		Pf6N2E2_5338	0.18	-7.7
6,132,864	+		Pf6N2E2_5338	0.18	-6.5
6,132,865	-		Pf6N2E2_5338	0.18	-4.8
6,132,865	-		Pf6N2E2_5338	0.18	-6.9
6,132,972	+		Pf6N2E2_5338	0.26	-4.6
6,132,981	+		Pf6N2E2_5338	0.27	-7.8
6,132,981	+		Pf6N2E2_5338	0.27	-7.1
6,132,982	-		Pf6N2E2_5338	0.27	-6.5
6,133,060	-		Pf6N2E2_5338	0.34	-8.1
6,133,170	+		Pf6N2E2_5338	0.43	-6.6
6,133,171	-		Pf6N2E2_5338	0.43	-6.9
6,133,171	-		Pf6N2E2_5338	0.43	-8.2
6,133,365	+		Pf6N2E2_5338	0.59	-6.5
6,133,365	+		Pf6N2E2_5338	0.59	-5.9
6,133,365	+		Pf6N2E2_5338	0.59	-5.5
6,133,366	-		Pf6N2E2_5338	0.59	-7.1
6,133,368	+		Pf6N2E2_5338	0.59	-3.5
6,133,368	+		Pf6N2E2_5338	0.59	-7.3
6,133,382	+		Pf6N2E2_5338	0.60	-6.7
6,133,452	+		Pf6N2E2_5338	0.66	-6.6
6,133,452	+		Pf6N2E2_5338	0.66	-6.0
6,133,452	+		Pf6N2E2_5338	0.66	-7.8
6,133,453	-		Pf6N2E2_5338	0.66	-6.0
6,133,453	-		Pf6N2E2_5338	0.66	-6.9
6,133,453	-		Pf6N2E2_5338	0.66	-6.1
6,133,453	-		Pf6N2E2_5338	0.66	-7.6
6,133,453	-		Pf6N2E2_5338	0.66	-9.8
6,133,453	-		Pf6N2E2_5338	0.66	-7.1
6,133,524	+		Pf6N2E2_5338	0.72	-4.0
6,133,524	+		Pf6N2E2_5338	0.72	-6.5
6,133,540	-		Pf6N2E2_5338	0.73	-8.4
6,133,656	+		Pf6N2E2_5338	0.83	-5.7
6,133,782	+				-5.0
6,133,782	+				-6.2
6,133,791	+				-5.9
6,133,812	+				-2.7
6,133,905	+				-7.1
6,133,905	+				-6.6
6,133,996	+		Pf6N2E2_5339	0.17	-6.7
6,133,997	-		Pf6N2E2_5339	0.17	-5.0
6,134,009	+		Pf6N2E2_5339	0.19	-6.4
6,134,009	+		Pf6N2E2_5339	0.19	-4.8
6,134,009	+		Pf6N2E2_5339	0.19	-4.4
6,134,009	+		Pf6N2E2_5339	0.19	-4.0
6,134,009	+		Pf6N2E2_5339	0.19	-7.8
6,134,231	+		Pf6N2E2_5339	0.47	-7.5
6,134,231	+		Pf6N2E2_5339	0.47	-6.9
6,134,231	+		Pf6N2E2_5339	0.47	-7.9
6,134,232	-		Pf6N2E2_5339	0.47	-5.0
6,134,252	+		Pf6N2E2_5339	0.50	-6.0
6,134,252	+		Pf6N2E2_5339	0.50	-6.9
6,134,252	+		Pf6N2E2_5339	0.50	-4.0
6,134,252	+		Pf6N2E2_5339	0.50	-7.3
6,134,252	+		Pf6N2E2_5339	0.50	-8.2
6,134,253	-		Pf6N2E2_5339	0.50	-6.4
6,134,253	-		Pf6N2E2_5339	0.50	-8.6
6,134,319	+		Pf6N2E2_5339	0.58	-6.3
6,134,319	+		Pf6N2E2_5339	0.58	-6.3
6,134,349	+		Pf6N2E2_5339	0.62	-6.9
6,134,448	+		Pf6N2E2_5339	0.75	-5.9
6,134,448	+		Pf6N2E2_5339	0.75	-7.0
6,134,448	+		Pf6N2E2_5339	0.75	-5.2
6,134,449	-		Pf6N2E2_5339	0.75	-6.6
6,134,449	-		Pf6N2E2_5339	0.75	-7.0
6,134,458	+		Pf6N2E2_5339	0.76	-7.6
6,134,567	+				-2.2
6,134,567	+				-7.4
6,134,567	+				-3.2
6,134,567	+				-6.0
6,134,567	+				-8.1
6,134,567	+				-6.7
6,134,567	+				-7.2
6,134,567	+				-6.6
6,134,567	+				-8.1
6,134,567	+				-6.4
6,134,568	-				-3.3
6,134,568	-				-7.0
6,134,568	-				-8.2
6,134,568	-				-5.9
6,134,568	-				-7.7
6,134,571	+				-6.2
6,134,571	+				-6.3
6,134,571	+				-5.3
6,134,571	+				-4.6
6,134,571	+				-5.7
6,134,571	+				-6.4
6,134,571	+				-3.1
6,134,571	+				-4.8
6,134,571	+				-5.5
6,134,571	+				-5.6
6,134,571	+				-5.6
6,134,571	+				-5.4
6,134,571	+				-6.8
6,134,571	+				-6.2
6,134,571	+				-4.9
6,134,571	+				-4.6
6,134,572	-				-4.6
6,134,572	-				-0.6
6,134,572	-				+0.4
6,134,572	-				+0.4
6,134,572	-				+0.4
6,134,579	+				-6.9
6,134,580	-				-6.2
6,134,598	+				+0.4
6,134,624	+				-0.7
6,134,645	+				-0.8
6,134,653	+				-0.9
6,134,653	+				-1.2
6,134,653	+				-0.6
6,134,693	+				+0.4
6,134,693	+				+0.4
6,134,698	+				-0.6
6,134,698	+				-0.5
6,134,698	+				-0.6
6,134,698	+				-0.3
6,134,698	+				-0.4
6,134,898	+		Pf6N2E2_5340	0.17	-2.0
6,134,899	-		Pf6N2E2_5340	0.17	-2.0
6,135,012	+		Pf6N2E2_5340	0.35	+0.4
6,135,012	+		Pf6N2E2_5340	0.35	+0.4
6,135,013	-		Pf6N2E2_5340	0.36	-1.8
6,135,211	+		Pf6N2E2_5340	0.68	+0.4
6,135,269	-		Pf6N2E2_5340	0.77	-2.3
6,135,339	+		Pf6N2E2_5340	0.88	-1.9
6,135,339	+		Pf6N2E2_5340	0.88	-1.4
6,135,340	-		Pf6N2E2_5340	0.89	+0.4
6,135,340	-				+0.4
6,135,341	+		Pf6N2E2_5340	0.89	-2.0
6,135,341	+		Pf6N2E2_5340	0.89	+0.4
6,135,341	+		Pf6N2E2_5340	0.89	-2.5
6,135,341	+		Pf6N2E2_5340	0.89	-0.9
6,135,409	-				+0.4
6,135,415	+				+0.4
6,135,415	+				-1.2
6,135,415	+				+0.4
6,135,445	+				-1.0
6,135,445	+				-1.0
6,135,445	+				-0.2
6,135,445	+				-1.0
6,135,445	+				+0.4
6,135,446	-				+0.4
6,135,463	+				-0.6