Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5333

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,127,449	+		Pf6N2E2_5332	0.18	-0.6
6,127,450	-		Pf6N2E2_5332	0.18	+0.4
6,127,450	-		Pf6N2E2_5332	0.18	+0.4
6,127,450	-		Pf6N2E2_5332	0.18	-0.6
6,127,450	-		Pf6N2E2_5332	0.18	-0.6
6,127,450	-		Pf6N2E2_5332	0.18	+0.4
6,127,547	-		Pf6N2E2_5332	0.28	+0.4
6,127,641	+		Pf6N2E2_5332	0.37	+0.4
6,127,641	+		Pf6N2E2_5332	0.37	-0.6
6,127,642	-		Pf6N2E2_5332	0.37	-0.7
6,127,642	-		Pf6N2E2_5332	0.37	-1.0
6,127,659	+		Pf6N2E2_5332	0.39	+0.4
6,127,659	+		Pf6N2E2_5332	0.39	+0.4
6,127,659	+		Pf6N2E2_5332	0.39	-0.9
6,127,660	-		Pf6N2E2_5332	0.39	-0.6
6,127,660	-		Pf6N2E2_5332	0.39	+0.4
6,127,660	-		Pf6N2E2_5332	0.39	+0.2
6,127,719	+		Pf6N2E2_5332	0.45	+0.4
6,127,719	+		Pf6N2E2_5332	0.45	+0.4
6,127,719	+		Pf6N2E2_5332	0.45	+0.4
6,127,719	+		Pf6N2E2_5332	0.45	-0.6
6,127,719	+		Pf6N2E2_5332	0.45	-0.6
6,127,720	-		Pf6N2E2_5332	0.45	-1.2
6,127,720	-		Pf6N2E2_5332	0.45	+0.4
6,127,720	-		Pf6N2E2_5332	0.45	-1.2
6,127,720	-		Pf6N2E2_5332	0.45	-0.5
6,127,725	+		Pf6N2E2_5332	0.46	-0.6
6,127,726	-		Pf6N2E2_5332	0.46	+0.4
6,127,726	-		Pf6N2E2_5332	0.46	+0.4
6,127,805	+		Pf6N2E2_5332	0.54	-1.0
6,127,805	+		Pf6N2E2_5332	0.54	-0.6
6,127,806	-		Pf6N2E2_5332	0.54	+0.4
6,127,848	+		Pf6N2E2_5332	0.58	-2.2
6,127,849	-		Pf6N2E2_5332	0.58	+0.4
6,128,032	+		Pf6N2E2_5332	0.77	-0.2
6,128,060	+		Pf6N2E2_5332	0.80	+0.4
6,128,060	+		Pf6N2E2_5332	0.80	-1.2
6,128,060	+		Pf6N2E2_5332	0.80	-0.6
6,128,060	+		Pf6N2E2_5332	0.80	+0.4
6,128,060	+		Pf6N2E2_5332	0.80	+0.4
6,128,060	+		Pf6N2E2_5332	0.80	-0.3
6,128,060	+		Pf6N2E2_5332	0.80	+0.4
6,128,061	-		Pf6N2E2_5332	0.80	-0.6
6,128,061	-		Pf6N2E2_5332	0.80	+0.0
6,128,061	-		Pf6N2E2_5332	0.80	+0.4
6,128,061	-		Pf6N2E2_5332	0.80	+0.4
6,128,061	-		Pf6N2E2_5332	0.80	-0.6
6,128,061	-		Pf6N2E2_5332	0.80	+0.4
6,128,260	+				-0.4
6,128,260	+				+0.4
6,128,260	+				+0.4
6,128,260	+				-0.6
6,128,260	+				-0.2
6,128,260	+				-0.7
6,128,260	+				+0.4
6,128,260	+				+0.4
6,128,261	-				+0.4
6,128,261	-				-0.6
6,128,261	-				-0.6
6,128,261	-				-0.6
6,128,261	-				+0.4
6,128,261	-				+0.4
6,128,261	-				-0.3
6,128,266	+				-0.6
6,128,266	+				+0.4
6,128,266	+				+0.4
6,128,266	+				+0.4
6,128,266	+				+0.4
6,128,266	+				-1.2
6,128,267	-				+0.4
6,128,267	-				-3.6
6,128,267	-				-0.5
6,128,267	-				+0.4
6,128,283	+				-0.6
6,128,283	+				+0.3
6,128,284	-				-0.4
6,128,366	+				-0.5
6,128,464	+				+0.4
6,128,464	+				-0.6
6,128,464	+				-1.2
6,128,592	+		Pf6N2E2_5333	0.16	+0.4
6,128,593	-		Pf6N2E2_5333	0.16	+0.0
6,128,619	+		Pf6N2E2_5333	0.18	-0.9
6,128,620	-		Pf6N2E2_5333	0.18	-0.1
6,128,703	+		Pf6N2E2_5333	0.26	+0.4
6,128,742	+		Pf6N2E2_5333	0.29	+0.4
6,128,742	+		Pf6N2E2_5333	0.29	-1.2
6,128,742	+		Pf6N2E2_5333	0.29	+0.4
6,128,743	-		Pf6N2E2_5333	0.29	-0.3
6,128,743	-		Pf6N2E2_5333	0.29	-0.1
6,128,743	-		Pf6N2E2_5333	0.29	-0.2
6,128,743	-		Pf6N2E2_5333	0.29	-0.2
6,128,856	+		Pf6N2E2_5333	0.39	-0.6
6,128,856	+		Pf6N2E2_5333	0.39	-0.6
6,128,856	+		Pf6N2E2_5333	0.39	+0.4
6,128,857	-		Pf6N2E2_5333	0.39	-0.4
6,128,857	-		Pf6N2E2_5333	0.39	-1.2
6,128,857	-		Pf6N2E2_5333	0.39	-0.0
6,128,857	-		Pf6N2E2_5333	0.39	-0.2
6,128,857	-		Pf6N2E2_5333	0.39	-0.2
6,128,857	-		Pf6N2E2_5333	0.39	-0.3
6,129,114	+		Pf6N2E2_5333	0.62	+0.4
6,129,131	-		Pf6N2E2_5333	0.63	-0.2
6,129,204	+		Pf6N2E2_5333	0.70	+0.4
6,129,204	+		Pf6N2E2_5333	0.70	+0.8
6,129,205	-		Pf6N2E2_5333	0.70	+0.4
6,129,205	-		Pf6N2E2_5333	0.70	+0.4
6,129,375	+		Pf6N2E2_5333	0.85	+0.4
6,129,375	+		Pf6N2E2_5333	0.85	-1.8
6,129,375	+		Pf6N2E2_5333	0.85	-0.3
6,129,375	+		Pf6N2E2_5333	0.85	+0.4
6,129,376	-		Pf6N2E2_5333	0.85	-0.1
6,129,498	+				+0.4
6,129,499	-				+0.4
6,129,622	+				-0.6
6,129,622	+				-0.4
6,129,622	+				+0.4
6,129,622	+				-0.1
6,129,622	+				-0.6
6,129,622	+				+0.4
6,129,891	+		Pf6N2E2_5334	0.20	-0.2
6,129,891	+		Pf6N2E2_5334	0.20	-1.0
6,129,892	-		Pf6N2E2_5334	0.20	-1.0
6,129,928	-		Pf6N2E2_5334	0.24	+0.4
6,129,945	+		Pf6N2E2_5334	0.25	-0.6
6,129,945	+		Pf6N2E2_5334	0.25	-1.2
6,129,945	+		Pf6N2E2_5334	0.25	+0.4
6,129,946	-		Pf6N2E2_5334	0.26	-1.2
6,129,946	-				+0.4
6,129,946	-		Pf6N2E2_5334	0.26	-0.5
6,129,946	-		Pf6N2E2_5334	0.26	-0.6
6,129,946	-		Pf6N2E2_5334	0.26	-1.0
6,129,946	-		Pf6N2E2_5334	0.26	+0.4
6,129,988	-		Pf6N2E2_5334	0.30	-0.6
6,130,098	+		Pf6N2E2_5334	0.40	-1.6
6,130,098	+		Pf6N2E2_5334	0.40	-0.7
6,130,098	+		Pf6N2E2_5334	0.40	-0.1
6,130,335	+		Pf6N2E2_5334	0.63	+0.4
6,130,335	+		Pf6N2E2_5334	0.63	-0.5
6,130,336	-		Pf6N2E2_5334	0.63	-1.2
6,130,348	-		Pf6N2E2_5334	0.64	-0.6
6,130,348	-		Pf6N2E2_5334	0.64	-0.6
6,130,431	+		Pf6N2E2_5334	0.72	-1.3
6,130,432	-		Pf6N2E2_5334	0.72	-1.9
6,130,438	+		Pf6N2E2_5334	0.73	-0.1
6,130,506	+		Pf6N2E2_5334	0.79	-1.3
6,130,506	+		Pf6N2E2_5334	0.79	+0.4
6,130,507	-		Pf6N2E2_5334	0.79	+0.4
6,130,518	+		Pf6N2E2_5334	0.80	-1.3
6,130,518	+		Pf6N2E2_5334	0.80	-0.6
6,130,518	+		Pf6N2E2_5334	0.80	+0.4