Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5246

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,041,346	+				+1.4
6,041,346	+				-0.6
6,041,346	+				+0.4
6,041,346	+				-0.6
6,041,405	+				-0.6
6,041,420	+				-1.5
6,041,420	+				-0.6
6,041,420	+				-0.5
6,041,420	+				-0.6
6,041,420	+				-1.3
6,041,421	-				+0.4
6,041,421	-				+0.4
6,041,421	-				+0.4
6,041,421	-				-0.3
6,041,481	+				+0.4
6,041,498	+				-0.6
6,041,498	+				+0.6
6,041,498	+				+0.4
6,041,499	-				-1.1
6,041,523	-				+0.4
6,041,912	+		Pf6N2E2_5245	0.59	-0.6
6,041,912	+		Pf6N2E2_5245	0.59	+0.4
6,041,912	+		Pf6N2E2_5245	0.59	+0.4
6,041,912	+		Pf6N2E2_5245	0.59	-1.1
6,041,913	-		Pf6N2E2_5245	0.60	+0.4
6,041,913	-		Pf6N2E2_5245	0.60	+0.4
6,041,913	-		Pf6N2E2_5245	0.60	+0.4
6,041,936	+		Pf6N2E2_5245	0.64	+0.4
6,041,936	+		Pf6N2E2_5245	0.64	+0.4
6,041,936	+		Pf6N2E2_5245	0.64	+0.4
6,041,936	+		Pf6N2E2_5245	0.64	-1.1
6,041,936	+		Pf6N2E2_5245	0.64	+0.4
6,041,936	+		Pf6N2E2_5245	0.64	-0.6
6,041,936	+		Pf6N2E2_5245	0.64	+0.4
6,041,936	+		Pf6N2E2_5245	0.64	+0.4
6,041,936	+		Pf6N2E2_5245	0.64	+0.2
6,041,937	-		Pf6N2E2_5245	0.64	-0.6
6,041,937	-		Pf6N2E2_5245	0.64	-1.3
6,041,937	-		Pf6N2E2_5245	0.64	-1.1
6,041,937	-		Pf6N2E2_5245	0.64	+0.4
6,041,937	-		Pf6N2E2_5245	0.64	-0.5
6,041,937	-		Pf6N2E2_5245	0.64	+0.4
6,041,937	-		Pf6N2E2_5245	0.64	+0.4
6,041,937	-		Pf6N2E2_5245	0.64	+0.4
6,041,937	-		Pf6N2E2_5245	0.64	+0.4
6,042,146	+				+0.4
6,042,147	-				+0.4
6,042,147	-				-0.6
6,042,147	-				-1.6
6,042,147	-				-1.6
6,042,150	+				+0.0
6,042,150	+				-0.7
6,042,150	+				-0.6
6,042,151	-				-0.6
6,042,151	-				-0.6
6,042,151	-				+0.4
6,042,151	-				-1.3
6,042,151	-				-2.9
6,042,229	-				-0.6
6,042,306	+		Pf6N2E2_5246	0.45	-0.5
6,042,307	-		Pf6N2E2_5246	0.46	-0.1
6,042,307	-		Pf6N2E2_5246	0.46	+0.4
6,042,307	-		Pf6N2E2_5246	0.46	+0.4
6,042,307	-		Pf6N2E2_5246	0.46	+0.4
6,042,307	-		Pf6N2E2_5246	0.46	+0.4
6,042,307	-		Pf6N2E2_5246	0.46	+2.1
6,042,387	+		Pf6N2E2_5246	0.85	+0.4
6,042,387	+		Pf6N2E2_5246	0.85	-0.1
6,042,458	+				+0.4
6,042,490	+				-1.6
6,042,562	+				-0.6
6,042,563	-				+0.4
6,042,738	-		Pf6N2E2_5247	0.53	-0.6
6,043,050	+				+0.4
6,043,082	+				-1.0
6,043,082	+				-2.1
6,043,083	-				-1.9
6,043,083	-				+0.4
6,043,083	-				+0.4
6,043,083	-				+0.4