Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5155

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
5,940,726	+		Pf6N2E2_5153	0.75	+0.5
5,940,727	-		Pf6N2E2_5153	0.75	-0.5
5,940,853	-				+0.5
5,940,853	-				+0.5
5,940,853	-				+0.5
5,940,914	-				+0.5
5,940,916	+				-0.5
5,940,916	+				+0.5
5,940,916	+				+0.5
5,940,916	+				-1.1
5,940,917	-				-1.5
5,940,917	-				-1.1
5,940,917	-				-1.5
5,940,917	-				+0.5
5,940,940	+				-1.1
5,940,941	-				-1.1
5,940,955	+				+0.5
5,940,956	-				-1.1
5,940,965	-				-1.1
5,940,985	+				+0.5
5,940,985	+				+0.5
5,940,985	+				+0.5
5,940,985	+				+0.5
5,940,985	+				-0.9
5,940,985	+				-0.5
5,940,985	+				-1.1
5,940,986	-				+0.5
5,940,986	-				+0.5
5,940,986	-				+0.5
5,940,986	-				+0.5
5,940,986	-				-1.5
5,940,986	-				-1.1
5,940,986	-				-0.5
5,940,986	-				+0.5
5,940,986	-				+0.5
5,940,986	-				-0.5
5,940,986	-				+0.5
5,940,986	-				-1.5
5,940,988	-				-0.3
5,941,002	+				-0.5
5,941,002	+				-0.5
5,941,002	+				+0.5
5,941,002	+				-0.5
5,941,003	-				+0.5
5,941,003	-				+0.5
5,941,003	-				+1.0
5,941,003	-				-0.5
5,941,017	+				+0.5
5,941,018	-				-0.5
5,941,018	-				+0.5
5,941,018	-				-1.9
5,941,069	-				-0.5
5,941,069	-				+0.5
5,941,069	-				-1.1
5,941,070	+				-1.1
5,941,070	+				-0.5
5,941,070	+				-0.5
5,941,071	-				-0.5
5,941,071	-				+0.5
5,941,071	-				-2.1
5,941,071	-				+0.5
5,941,130	+				-0.5
5,941,206	+				-0.2
5,941,674	-				-0.5
5,941,674	-				-2.1
5,942,235	-		Pf6N2E2_5155	0.39	+0.0
5,942,462	-		Pf6N2E2_5155	0.55	+0.5
5,942,592	-		Pf6N2E2_5155	0.65	-1.9
5,942,595	-		Pf6N2E2_5155	0.65	-0.5
5,942,830	+		Pf6N2E2_5155	0.82	-1.5
5,942,919	-		Pf6N2E2_5155	0.88	-2.7
5,942,919	-		Pf6N2E2_5155	0.88	+0.5
5,943,110	-				+0.5
5,943,154	+				-1.7
5,943,154	+				-2.2
5,943,155	-				+0.5
5,943,161	+				+0.5
5,943,161	+				+0.5
5,943,223	+				+0.5
5,943,224	-				-0.5
5,943,282	+				-0.5
5,943,283	-				-0.3
5,943,287	-				+0.5
5,943,302	+				-1.1
5,943,306	-				-1.5
5,943,468	-				-0.5
5,943,468	-				+0.5
5,943,503	+				-0.5
5,943,504	-				-1.1
5,943,504	-				-0.5
5,943,504	-				-1.1
5,943,504	-				-1.4
5,943,529	+				-0.5
5,943,530	-				+0.5
5,943,557	-				+0.5
5,943,581	-				-1.7
5,943,586	+				+0.5
5,943,608	+				-0.5
5,943,619	+				-1.6
5,943,628	+				-1.5
5,943,628	+				+0.5
5,943,629	-				-0.4
5,943,686	+				-0.5
5,943,686	+				+0.5
5,943,687	-				+0.5
5,943,688	+				-3.0
5,943,689	-				-1.9
5,943,732	+				+0.5
5,943,733	-				+0.5
5,943,733	-				+0.5
5,943,750	-				+0.5
5,943,768	-				+0.5
5,943,768	-				-1.5
5,943,955	-		Pf6N2E2_5156	0.10	-0.5