Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5073

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
5,848,367	+				+0.4
5,848,370	-				-1.1
5,848,370	-				-0.6
5,848,374	+				-0.1
5,848,374	+				+0.4
5,848,374	+				-0.3
5,848,374	+				-1.1
5,848,375	-				+0.4
5,848,375	-				+0.4
5,848,375	-				+0.4
5,848,375	-				-1.1
5,848,375	-				+0.4
5,848,375	-				+0.4
5,848,379	-				-0.5
5,848,564	-				+0.4
5,848,564	-				-0.6
5,848,663	+		Pf6N2E2_5072	0.22	+0.4
5,848,663	+		Pf6N2E2_5072	0.22	+0.4
5,848,664	-		Pf6N2E2_5072	0.22	-0.6
5,848,664	-		Pf6N2E2_5072	0.22	+0.4
5,848,664	-		Pf6N2E2_5072	0.22	+0.4
5,848,878	+		Pf6N2E2_5072	0.50	-0.6
5,848,930	+		Pf6N2E2_5072	0.56	+0.4
5,848,930	+		Pf6N2E2_5072	0.56	-1.1
5,848,930	+		Pf6N2E2_5072	0.56	-1.1
5,848,930	+		Pf6N2E2_5072	0.56	+0.4
5,848,930	+		Pf6N2E2_5072	0.56	-0.4
5,848,930	+		Pf6N2E2_5072	0.56	+0.4
5,848,930	+		Pf6N2E2_5072	0.56	+0.4
5,848,931	-		Pf6N2E2_5072	0.56	-0.6
5,848,931	-		Pf6N2E2_5072	0.56	+0.4
5,848,931	-		Pf6N2E2_5072	0.56	-1.9
5,848,931	-		Pf6N2E2_5072	0.56	-1.1
5,848,960	+		Pf6N2E2_5072	0.60	+0.4
5,848,961	-		Pf6N2E2_5072	0.60	+0.4
5,848,961	-		Pf6N2E2_5072	0.60	-0.6
5,848,961	-		Pf6N2E2_5072	0.60	-1.3
5,848,997	-		Pf6N2E2_5072	0.65	+0.4
5,849,009	-		Pf6N2E2_5072	0.67	+0.4
5,849,260	+				+0.4
5,849,261	-				+0.4
5,849,266	+				-0.5
5,849,266	+				+0.4
5,849,266	+				-0.6
5,849,267	-				+0.4
5,849,267	-				-0.6
5,849,475	-		Pf6N2E2_5073	0.45	-1.6
5,849,475	-		Pf6N2E2_5073	0.45	-3.7
5,849,480	-		Pf6N2E2_5073	0.46	+0.4
5,849,487	+		Pf6N2E2_5073	0.48	+0.4
5,849,487	+		Pf6N2E2_5073	0.48	-0.6
5,849,691	+				+0.4
5,849,691	+				-0.2
5,849,692	-				+0.4
5,849,692	-				+0.4
5,849,692	-				-1.1
5,849,707	+				-0.6
5,849,708	-				-0.7
5,849,708	-				+0.4
5,849,708	-				-0.4
5,849,708	-				-0.6
5,849,717	-				-1.1
5,849,742	+				-0.6
5,849,743	-				-0.6
5,849,743	-				-0.9
5,849,743	-				+0.4
5,849,743	-				-1.4
5,849,779	+				+0.4
5,849,780	-				+0.4
5,849,780	-				+0.4
5,849,780	-				-0.4
5,849,793	+				-0.6
5,849,794	-				-1.1
5,849,794	-				+0.4
5,849,794	-				-0.3
5,849,905	+				+0.5
5,849,906	-				-1.1
5,849,909	+				+0.4
5,849,910	-				+0.4
5,849,910	-				-0.9
5,849,931	+				+0.4
5,849,932	-				-0.5
5,849,962	+				+0.4
5,849,962	+				-1.1
5,849,962	+				-0.6
5,849,962	+				+0.4
5,849,962	+				+0.4
5,849,962	+				+0.4
5,849,963	-				-0.6
5,849,963	-				-0.8
5,849,964	+				-0.8
5,849,965	-				-1.3
5,849,965	-				+0.4
5,849,965	-				+0.4
5,849,965	-				-0.9
5,849,965	-				+0.0
5,849,984	+				+0.4
5,849,984	+				+0.4
5,849,984	+				+0.4
5,849,985	-				+0.4
5,849,985	-				+0.4
5,849,985	-				-1.1
5,849,985	-				-0.5
5,849,985	-				-1.6
5,849,985	-				+0.4
5,850,012	+				+0.4
5,850,012	+				+0.4
5,850,012	+				-0.6
5,850,012	+				-0.5
5,850,597	+		Pf6N2E2_5074	0.40	-0.6
5,850,597	+		Pf6N2E2_5074	0.40	+0.4
5,850,649	+		Pf6N2E2_5074	0.43	-0.6
5,850,649	+		Pf6N2E2_5074	0.43	-0.6
5,850,649	+		Pf6N2E2_5074	0.43	-1.1
5,850,649	+		Pf6N2E2_5074	0.43	+0.4
5,850,649	+		Pf6N2E2_5074	0.43	-1.1
5,850,649	+		Pf6N2E2_5074	0.43	-0.6
5,850,650	-		Pf6N2E2_5074	0.43	+1.4
5,850,650	-		Pf6N2E2_5074	0.43	-0.1
5,850,650	-		Pf6N2E2_5074	0.43	-1.6
5,850,657	+		Pf6N2E2_5074	0.44	+0.4
5,850,657	+		Pf6N2E2_5074	0.44	+0.4
5,850,657	+		Pf6N2E2_5074	0.44	+0.4
5,850,658	-		Pf6N2E2_5074	0.44	-1.1
5,850,658	-		Pf6N2E2_5074	0.44	+0.4
5,850,658	-		Pf6N2E2_5074	0.44	-0.6
5,850,658	-		Pf6N2E2_5074	0.44	-1.6
5,850,690	+		Pf6N2E2_5074	0.46	-0.3