Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4935

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
5,687,230	+				+0.5
5,687,230	+				+0.0
5,687,393	+		Pf6N2E2_4935	0.17	+0.5
5,687,393	+		Pf6N2E2_4935	0.17	-0.5
5,687,393	+		Pf6N2E2_4935	0.17	+0.5
5,687,413	+				-0.3
5,687,414	-		Pf6N2E2_4935	0.19	+0.5
5,687,578	-		Pf6N2E2_4935	0.33	-0.5
5,687,617	-		Pf6N2E2_4935	0.37	+0.1
5,687,873	+		Pf6N2E2_4935	0.59	-0.5
5,687,873	+		Pf6N2E2_4935	0.59	-0.0
5,687,874	-		Pf6N2E2_4935	0.59	+1.2
5,688,011	-		Pf6N2E2_4935	0.72	-0.5
5,688,173	-		Pf6N2E2_4935	0.86	-0.5
5,688,366	+				+0.5
5,688,367	-				-0.9
5,688,367	-				-0.5
5,688,406	+				+0.5
5,688,407	-				-0.3
5,688,407	-				-1.5
5,688,407	-				-1.3
5,688,429	+				-0.5
5,688,429	+				+0.5
5,688,429	+				-2.3
5,688,429	+				-1.1
5,688,430	-				-0.5
5,688,430	-				-2.1
5,688,430	-				+0.5
5,688,472	+				-1.1
5,688,473	-				-0.5
5,688,504	+				-0.3
5,688,504	+				+0.5
5,688,504	+				-0.1
5,688,504	+				-0.7
5,688,505	-				-0.9
5,688,505	-				+0.5
5,688,505	-				+0.5
5,688,505	-				-0.1
5,688,505	-				+0.5
5,688,505	-				+0.5
5,688,505	-				+0.5
5,688,545	-				+0.5
5,688,601	+				-0.5
5,688,601	+				+0.5
5,688,601	+				+0.5
5,688,601	+				-0.5
5,688,601	+				-1.1
5,688,601	+				+0.5
5,688,601	+				+0.5
5,688,601	+				-1.1
5,688,601	+				+0.5
5,688,601	+				-1.1
5,688,602	-				+0.5
5,688,602	-				-0.5
5,688,602	-				-1.1
5,688,602	-				-1.5
5,688,602	-				+0.5
5,688,602	-				+0.5
5,688,602	-				-0.5
5,688,602	-				-0.5
5,688,602	-				+0.5
5,688,621	-				-0.5
5,688,869	-		Pf6N2E2_4936	0.34	-0.5
5,688,901	+		Pf6N2E2_4936	0.38	+0.5
5,688,901	+		Pf6N2E2_4936	0.38	-0.6
5,688,901	+		Pf6N2E2_4936	0.38	+0.5
5,688,902	-		Pf6N2E2_4936	0.38	-0.6
5,688,976	+		Pf6N2E2_4936	0.47	-2.1
5,688,976	+		Pf6N2E2_4936	0.47	+0.5
5,688,976	+		Pf6N2E2_4936	0.47	-1.1
5,688,976	+		Pf6N2E2_4936	0.47	-0.4
5,688,977	-		Pf6N2E2_4936	0.47	-0.5
5,688,977	-		Pf6N2E2_4936	0.47	+0.5
5,688,977	-		Pf6N2E2_4936	0.47	+0.5
5,688,977	-		Pf6N2E2_4936	0.47	+0.5
5,688,977	-		Pf6N2E2_4936	0.47	+0.5
5,688,977	-		Pf6N2E2_4936	0.47	+1.5
5,689,060	-		Pf6N2E2_4936	0.58	+0.0
5,689,192	+		Pf6N2E2_4936	0.75	-0.5
5,689,192	+		Pf6N2E2_4936	0.75	-0.7
5,689,192	+		Pf6N2E2_4936	0.75	-0.5
5,689,192	+		Pf6N2E2_4936	0.75	-1.1
5,689,193	-		Pf6N2E2_4936	0.75	-0.4
5,689,193	-		Pf6N2E2_4936	0.75	-0.5
5,689,193	-		Pf6N2E2_4936	0.75	-0.3
5,689,193	-		Pf6N2E2_4936	0.75	+0.5
5,689,193	-		Pf6N2E2_4936	0.75	-0.5
5,689,193	-		Pf6N2E2_4936	0.75	-0.5
5,689,201	+		Pf6N2E2_4936	0.76	-0.5
5,689,201	+		Pf6N2E2_4936	0.76	+0.5
5,689,201	+		Pf6N2E2_4936	0.76	-0.4
5,689,201	+		Pf6N2E2_4936	0.76	+0.5
5,689,202	-		Pf6N2E2_4936	0.76	-0.5
5,689,202	-		Pf6N2E2_4936	0.76	-0.5
5,689,202	-		Pf6N2E2_4936	0.76	-1.9
5,689,211	-		Pf6N2E2_4936	0.77	-1.0
5,689,211	-		Pf6N2E2_4936	0.77	-1.9
5,689,211	-		Pf6N2E2_4936	0.77	-0.5
5,689,211	-		Pf6N2E2_4936	0.77	+0.5
5,689,211	-		Pf6N2E2_4936	0.77	-0.5
5,689,222	+		Pf6N2E2_4936	0.78	-0.2
5,689,222	+		Pf6N2E2_4936	0.78	-0.7
5,689,223	-		Pf6N2E2_4936	0.78	-2.7
5,689,223	-		Pf6N2E2_4936	0.78	-1.1
5,689,223	-		Pf6N2E2_4936	0.78	-1.1
5,689,237	+		Pf6N2E2_4936	0.80	+0.5