Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4839

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
5,590,147	+		Pf6N2E2_4838	0.13	-0.5
5,590,147	+		Pf6N2E2_4838	0.13	+0.2
5,590,147	+		Pf6N2E2_4838	0.13	-1.1
5,590,147	+		Pf6N2E2_4838	0.13	+0.5
5,590,148	-		Pf6N2E2_4838	0.13	+0.5
5,590,148	-		Pf6N2E2_4838	0.13	+0.2
5,590,157	+		Pf6N2E2_4838	0.14	-0.0
5,590,172	+		Pf6N2E2_4838	0.15	-0.5
5,590,250	+		Pf6N2E2_4838	0.22	+0.1
5,590,317	+		Pf6N2E2_4838	0.28	+0.3
5,590,317	+		Pf6N2E2_4838	0.28	+0.5
5,590,318	-		Pf6N2E2_4838	0.28	-1.9
5,590,318	-		Pf6N2E2_4838	0.28	-0.5
5,590,318	-		Pf6N2E2_4838	0.28	+0.5
5,590,380	+		Pf6N2E2_4838	0.34	+0.5
5,590,380	+		Pf6N2E2_4838	0.34	+0.5
5,590,381	-		Pf6N2E2_4838	0.34	+0.5
5,590,381	-		Pf6N2E2_4838	0.34	-0.1
5,590,519	-		Pf6N2E2_4838	0.47	-1.5
5,590,519	-		Pf6N2E2_4838	0.47	+0.5
5,590,519	-		Pf6N2E2_4838	0.47	-0.5
5,590,536	+		Pf6N2E2_4838	0.48	-0.1
5,590,536	+		Pf6N2E2_4838	0.48	-0.5
5,590,536	+		Pf6N2E2_4838	0.48	+0.5
5,590,536	+		Pf6N2E2_4838	0.48	+0.1
5,590,537	-		Pf6N2E2_4838	0.48	+0.5
5,590,537	-		Pf6N2E2_4838	0.48	-0.9
5,590,537	-		Pf6N2E2_4838	0.48	+0.5
5,590,585	-		Pf6N2E2_4838	0.53	+0.5
5,590,585	-		Pf6N2E2_4838	0.53	-0.5
5,590,776	+		Pf6N2E2_4838	0.70	-1.5
5,590,777	-		Pf6N2E2_4838	0.70	-1.1
5,590,777	-		Pf6N2E2_4838	0.70	+0.5
5,590,777	-		Pf6N2E2_4838	0.70	+0.7
5,590,781	+		Pf6N2E2_4838	0.71	-0.1
5,590,781	+		Pf6N2E2_4838	0.71	-0.4
5,590,782	-		Pf6N2E2_4838	0.71	+0.5
5,590,900	-		Pf6N2E2_4838	0.82	+0.5
5,590,916	+		Pf6N2E2_4838	0.83	-0.1
5,590,999	+				+0.5
5,590,999	+				+0.5
5,590,999	+				-0.5
5,590,999	+				-0.3
5,591,000	-				-0.1
5,591,000	-				+0.2
5,591,000	-				-0.5
5,591,000	-				+0.5
5,591,089	+				+0.5
5,591,089	+				+0.5
5,591,089	+				+0.1
5,591,089	+				-1.0
5,591,089	+				-1.1
5,591,089	+				+2.1
5,591,090	-				-1.9
5,591,090	-				+0.5
5,591,090	-				-0.1
5,591,090	-				-0.3
5,591,090	-				-1.1