Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4835

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
5,586,882	+				-0.6
5,586,883	-				-0.6
5,586,963	-		Pf6N2E2_4834	0.14	+0.2
5,586,963	-		Pf6N2E2_4834	0.14	-0.5
5,587,104	-		Pf6N2E2_4834	0.28	-0.1
5,587,114	+		Pf6N2E2_4834	0.29	-0.9
5,587,114	+		Pf6N2E2_4834	0.29	-0.5
5,587,115	-		Pf6N2E2_4834	0.29	-0.5
5,587,115	-		Pf6N2E2_4834	0.29	-0.3
5,587,115	-		Pf6N2E2_4834	0.29	+0.5
5,587,115	-		Pf6N2E2_4834	0.29	-3.0
5,587,157	-		Pf6N2E2_4834	0.34	-1.1
5,587,157	-		Pf6N2E2_4834	0.34	-0.5
5,587,157	-		Pf6N2E2_4834	0.34	-2.1
5,587,157	-		Pf6N2E2_4834	0.34	+0.5
5,587,157	-		Pf6N2E2_4834	0.34	-0.5
5,587,158	+		Pf6N2E2_4834	0.34	-0.5
5,587,158	+		Pf6N2E2_4834	0.34	+0.5
5,587,158	+		Pf6N2E2_4834	0.34	-0.5
5,587,159	-		Pf6N2E2_4834	0.34	+0.5
5,587,210	-		Pf6N2E2_4834	0.39	-0.5
5,587,210	-		Pf6N2E2_4834	0.39	-0.5
5,587,210	-		Pf6N2E2_4834	0.39	+0.5
5,587,280	+		Pf6N2E2_4834	0.46	-1.1
5,587,280	+		Pf6N2E2_4834	0.46	-1.1
5,587,281	-		Pf6N2E2_4834	0.47	-0.5
5,587,281	-		Pf6N2E2_4834	0.47	-0.5
5,587,281	-		Pf6N2E2_4834	0.47	-1.1
5,587,281	-		Pf6N2E2_4834	0.47	+0.9
5,587,281	-		Pf6N2E2_4834	0.47	-0.5
5,587,289	-		Pf6N2E2_4834	0.47	+0.5
5,587,449	+		Pf6N2E2_4834	0.64	+0.5
5,587,449	+		Pf6N2E2_4834	0.64	-0.5
5,587,450	-		Pf6N2E2_4834	0.64	-0.5
5,587,466	+		Pf6N2E2_4834	0.66	-0.4
5,587,466	+		Pf6N2E2_4834	0.66	-1.1
5,587,466	+		Pf6N2E2_4834	0.66	-0.6
5,587,466	+		Pf6N2E2_4834	0.66	-0.7
5,587,466	+		Pf6N2E2_4834	0.66	-1.1
5,587,466	+		Pf6N2E2_4834	0.66	-0.5
5,587,466	+		Pf6N2E2_4834	0.66	-0.2
5,587,466	+		Pf6N2E2_4834	0.66	-0.5
5,587,466	+		Pf6N2E2_4834	0.66	-1.5
5,587,467	-		Pf6N2E2_4834	0.66	-0.3
5,587,467	-		Pf6N2E2_4834	0.66	-0.5
5,587,467	-		Pf6N2E2_4834	0.66	-0.5
5,587,467	-		Pf6N2E2_4834	0.66	+0.5
5,587,467	-		Pf6N2E2_4834	0.66	-0.6
5,587,467	-		Pf6N2E2_4834	0.66	-1.9
5,587,509	-		Pf6N2E2_4834	0.70	-0.8
5,587,584	+		Pf6N2E2_4834	0.78	-1.1
5,587,584	+		Pf6N2E2_4834	0.78	-0.5
5,587,585	-		Pf6N2E2_4834	0.78	+0.1
5,587,585	-		Pf6N2E2_4834	0.78	-0.9
5,587,585	-		Pf6N2E2_4834	0.78	-0.5
5,587,697	-		Pf6N2E2_4834	0.89	-0.7
5,587,805	+				-0.7
5,587,806	-				-0.7
5,587,814	+				-0.2
5,587,835	+				-0.5
5,587,835	+				+0.5
5,587,835	+				-0.5
5,587,836	-				-0.5
5,587,836	-				+0.5
5,588,300	-				-0.5
5,588,300	-				+0.5
5,588,302	+				-0.5
5,588,309	+				+0.5
5,588,309	+				-1.1
5,588,309	+				+0.5
5,588,309	+				-0.6
5,588,309	+				-0.4
5,588,310	-				+0.5
5,588,310	-				-0.5
5,588,400	+				-0.5
5,588,400	+				-0.5
5,588,400	+				-0.5
5,588,400	+				-3.3
5,588,415	+				-1.1
5,588,434	+				-0.5
5,588,536	+		Pf6N2E2_4836	0.13	-0.5
5,588,536	+		Pf6N2E2_4836	0.13	+0.5
5,588,557	+		Pf6N2E2_4836	0.15	-1.1
5,588,558	-		Pf6N2E2_4836	0.15	+0.5
5,588,558	-		Pf6N2E2_4836	0.15	+0.5
5,588,740	+		Pf6N2E2_4836	0.33	-3.0
5,588,741	-		Pf6N2E2_4836	0.33	-3.0
5,588,741	-		Pf6N2E2_4836	0.33	+0.5
5,588,931	+		Pf6N2E2_4836	0.51	-1.5
5,588,932	-		Pf6N2E2_4836	0.51	+0.5
5,588,932	-		Pf6N2E2_4836	0.51	+0.5
5,589,011	-		Pf6N2E2_4836	0.59	-2.1
5,589,139	+		Pf6N2E2_4836	0.71	+0.5
5,589,140	-		Pf6N2E2_4836	0.71	-0.5
5,589,218	+		Pf6N2E2_4836	0.79	-1.1
5,589,219	-		Pf6N2E2_4836	0.79	-0.5