Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4779

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
5,520,950	+		Pf6N2E2_4778	0.64	+0.5
5,520,950	+		Pf6N2E2_4778	0.64	-0.5
5,520,950	+		Pf6N2E2_4778	0.64	+0.5
5,520,950	+		Pf6N2E2_4778	0.64	-1.5
5,520,950	+		Pf6N2E2_4778	0.64	+0.5
5,521,130	+		Pf6N2E2_4778	0.74	+0.5
5,521,130	+		Pf6N2E2_4778	0.74	+0.5
5,521,130	+		Pf6N2E2_4778	0.74	-1.1
5,521,131	-		Pf6N2E2_4778	0.74	-1.1
5,521,131	-		Pf6N2E2_4778	0.74	-1.1
5,521,131	-		Pf6N2E2_4778	0.74	-1.1
5,521,131	-		Pf6N2E2_4778	0.74	+0.5
5,521,134	-		Pf6N2E2_4778	0.74	+0.5
5,521,134	-		Pf6N2E2_4778	0.74	-1.1
5,521,134	-		Pf6N2E2_4778	0.74	-0.7
5,521,134	-		Pf6N2E2_4778	0.74	+0.5
5,521,134	-		Pf6N2E2_4778	0.74	+0.5
5,521,134	-		Pf6N2E2_4778	0.74	-1.1
5,521,226	+		Pf6N2E2_4778	0.80	+0.5
5,521,227	-		Pf6N2E2_4778	0.80	-1.3
5,521,227	-		Pf6N2E2_4778	0.80	+0.5
5,521,227	-		Pf6N2E2_4778	0.80	-2.3
5,521,227	-		Pf6N2E2_4778	0.80	-1.1
5,521,232	+		Pf6N2E2_4778	0.80	-0.5
5,521,232	+		Pf6N2E2_4778	0.80	+0.5
5,521,232	+		Pf6N2E2_4778	0.80	-0.5
5,521,232	+		Pf6N2E2_4778	0.80	+0.5
5,521,233	-		Pf6N2E2_4778	0.80	+0.5
5,521,233	-		Pf6N2E2_4778	0.80	-0.5
5,521,343	+		Pf6N2E2_4778	0.87	-1.2
5,521,344	-		Pf6N2E2_4778	0.87	-1.6
5,521,379	+		Pf6N2E2_4778	0.89	-0.9
5,521,447	+				+0.5
5,521,608	-				+0.5
5,521,609	+				-0.5
5,521,609	+				-0.5
5,521,609	+				+0.5
5,521,610	-				-0.5
5,521,610	-				-0.0
5,521,630	+				-0.8
5,521,630	+				-0.5
5,521,653	-				-0.5
5,521,653	-				+0.5
5,521,663	-				-1.5
5,521,967	+		Pf6N2E2_4779	0.29	-2.9
5,521,968	-		Pf6N2E2_4779	0.30	-1.1
5,522,002	+		Pf6N2E2_4779	0.37	+0.5
5,522,002	+		Pf6N2E2_4779	0.37	+0.5
5,522,002	+		Pf6N2E2_4779	0.37	+0.5
5,522,072	+		Pf6N2E2_4779	0.52	+0.5
5,522,072	+		Pf6N2E2_4779	0.52	-0.5
5,522,072	+		Pf6N2E2_4779	0.52	-0.5
5,522,073	-		Pf6N2E2_4779	0.52	-0.5
5,522,073	-		Pf6N2E2_4779	0.52	-0.5
5,522,137	-		Pf6N2E2_4779	0.66	-0.5
5,522,325	+				-0.5
5,522,325	+				+0.5
5,522,325	+				-1.5
5,522,325	+				+0.5
5,522,325	+				+0.5
5,522,331	-				+0.2
5,522,331	-				-1.3
5,522,331	-				+0.1
5,522,331	-				+0.5
5,522,351	+				+0.5
5,522,351	+				+0.5
5,522,352	-				+0.5
5,522,352	-				+0.5
5,522,398	+				-0.5
5,522,398	+				+0.5
5,522,399	-				+0.1
5,522,399	-				+0.5
5,522,461	+				-0.9
5,522,462	-				-0.5
5,522,462	-				+0.5
5,522,539	+				-0.1
5,522,539	+				-1.1
5,522,539	+				-1.5
5,522,539	+				+0.5
5,522,539	+				-0.5
5,522,539	+				-1.5
5,522,539	+				+0.5
5,522,539	+				-0.4
5,522,539	+				+0.5
5,522,539	+				-1.9
5,522,540	-				-0.5
5,522,540	-				-1.5
5,522,540	-				-1.5
5,522,540	-				-0.3
5,522,540	-				+0.5
5,522,540	-				+0.5
5,522,822	+		Pf6N2E2_4780	0.21	-0.9
5,522,823	-		Pf6N2E2_4780	0.21	-0.5
5,522,952	+		Pf6N2E2_4780	0.26	-0.5
5,522,953	-		Pf6N2E2_4780	0.26	+0.7
5,522,981	+		Pf6N2E2_4780	0.28	+0.5
5,522,981	+		Pf6N2E2_4780	0.28	+0.5
5,522,981	+		Pf6N2E2_4780	0.28	-1.9
5,522,981	+		Pf6N2E2_4780	0.28	-0.8
5,522,981	+		Pf6N2E2_4780	0.28	-0.5
5,522,982	-		Pf6N2E2_4780	0.28	-0.4
5,523,251	+		Pf6N2E2_4780	0.39	+0.5