Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4763

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
5,500,319	-		Pf6N2E2_4761	0.80	+0.5
5,500,319	-		Pf6N2E2_4761	0.80	-2.8
5,500,319	-		Pf6N2E2_4761	0.80	-1.1
5,500,491	+				-0.5
5,500,491	+				-0.5
5,500,491	+				+0.5
5,500,491	+				+0.9
5,500,491	+				-0.5
5,500,491	+				-1.1
5,500,491	+				-0.5
5,500,492	-				-0.5
5,500,492	-				-0.5
5,500,561	+				-0.5
5,500,561	+				+1.1
5,500,561	+				-0.4
5,500,561	+				-1.5
5,500,561	+				-1.5
5,500,561	+				+2.1
5,500,562	-				+0.1
5,500,562	-				-1.1
5,500,987	+		Pf6N2E2_4762	0.60	-1.5
5,500,987	+		Pf6N2E2_4762	0.60	+0.1
5,500,988	-		Pf6N2E2_4762	0.61	-0.5
5,501,057	+		Pf6N2E2_4762	0.70	-1.1
5,501,356	+		Pf6N2E2_4763	0.11	+0.5
5,501,356	+		Pf6N2E2_4763	0.11	+0.5
5,501,356	+		Pf6N2E2_4763	0.11	+0.5
5,501,356	+		Pf6N2E2_4763	0.11	-0.5
5,501,356	+		Pf6N2E2_4763	0.11	-0.5
5,501,356	+		Pf6N2E2_4763	0.11	+0.5
5,501,356	+		Pf6N2E2_4763	0.11	-2.3
5,501,356	+		Pf6N2E2_4763	0.11	-0.5
5,501,356	+		Pf6N2E2_4763	0.11	-1.5
5,501,356	+		Pf6N2E2_4763	0.11	-1.8
5,501,356	+		Pf6N2E2_4763	0.11	-1.1
5,501,356	+		Pf6N2E2_4763	0.11	+0.5
5,501,356	+		Pf6N2E2_4763	0.11	-1.1
5,501,356	+		Pf6N2E2_4763	0.11	+0.5
5,501,356	+		Pf6N2E2_4763	0.11	+0.5
5,501,357	-		Pf6N2E2_4763	0.11	-0.5
5,501,357	-		Pf6N2E2_4763	0.11	-1.8
5,501,357	-		Pf6N2E2_4763	0.11	+0.5
5,501,357	-		Pf6N2E2_4763	0.11	+0.5
5,501,464	+		Pf6N2E2_4763	0.24	-0.5
5,501,465	-		Pf6N2E2_4763	0.24	+0.5
5,501,465	-		Pf6N2E2_4763	0.24	-0.5
5,501,735	+		Pf6N2E2_4763	0.57	-1.5
5,501,735	+		Pf6N2E2_4763	0.57	+0.5
5,501,736	-		Pf6N2E2_4763	0.57	+0.5
5,501,818	+		Pf6N2E2_4763	0.68	-0.5
5,501,818	+		Pf6N2E2_4763	0.68	+0.5
5,501,818	+		Pf6N2E2_4763	0.68	-0.5
5,501,818	+		Pf6N2E2_4763	0.68	+0.5
5,501,818	+		Pf6N2E2_4763	0.68	+0.5
5,501,819	-		Pf6N2E2_4763	0.68	-0.5
5,501,819	-		Pf6N2E2_4763	0.68	-0.5
5,501,819	-		Pf6N2E2_4763	0.68	-0.5
5,501,819	-		Pf6N2E2_4763	0.68	-1.1
5,501,819	-		Pf6N2E2_4763	0.68	-0.5
5,501,888	-		Pf6N2E2_4763	0.76	+0.5
5,502,004	+				+0.1
5,502,004	+				+0.5
5,502,004	+				+0.5
5,502,004	+				-1.8
5,502,005	-				+0.5
5,502,005	-				+0.5
5,502,043	+				+0.5
5,502,043	+				-1.1
5,502,043	+				+0.5
5,502,043	+				+0.5
5,502,043	+				+0.5
5,502,044	-				-0.5
5,502,044	-				+0.5
5,502,078	-				+0.5
5,502,090	+				+0.5
5,502,091	-				+0.5
5,502,282	+		Pf6N2E2_4764	0.30	-0.5
5,502,282	+		Pf6N2E2_4764	0.30	-1.1
5,502,282	+		Pf6N2E2_4764	0.30	+0.5
5,502,282	+		Pf6N2E2_4764	0.30	+0.5
5,502,282	+		Pf6N2E2_4764	0.30	+0.5
5,502,282	+		Pf6N2E2_4764	0.30	-1.1
5,502,282	+		Pf6N2E2_4764	0.30	+0.5
5,502,282	+		Pf6N2E2_4764	0.30	+0.5
5,502,283	-		Pf6N2E2_4764	0.30	-0.5
5,502,283	-		Pf6N2E2_4764	0.30	+0.5
5,502,283	-		Pf6N2E2_4764	0.30	+0.5
5,502,283	-		Pf6N2E2_4764	0.30	-0.5
5,502,283	-		Pf6N2E2_4764	0.30	-0.5
5,502,894	+				-0.5
5,502,904	+				-0.5
5,502,904	+				-0.5
5,502,904	+				-0.5
5,502,904	+				+0.5
5,502,905	-				-0.5
5,502,905	-				-0.5
5,502,905	-				-0.5
5,502,905	-				-0.8
5,502,905	-				+0.5
5,502,975	+		Pf6N2E2_4765	0.33	-0.5
5,502,976	-		Pf6N2E2_4765	0.33	+2.1