Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4684

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
5,417,065	+				+0.5
5,417,072	+				-0.5
5,417,073	-				-0.5
5,417,073	-				-1.1
5,417,073	-				-0.5
5,417,220	+		Pf6N2E2_4683	0.24	-0.5
5,417,220	+		Pf6N2E2_4683	0.24	+0.5
5,417,220	+		Pf6N2E2_4683	0.24	+0.9
5,417,295	+		Pf6N2E2_4683	0.32	+0.5
5,417,296	-		Pf6N2E2_4683	0.32	-0.5
5,417,506	-		Pf6N2E2_4683	0.54	-0.9
5,417,571	+		Pf6N2E2_4683	0.61	+0.5
5,417,571	+		Pf6N2E2_4683	0.61	+0.5
5,417,572	-		Pf6N2E2_4683	0.61	+0.5
5,417,599	-		Pf6N2E2_4683	0.64	+0.5
5,417,599	-		Pf6N2E2_4683	0.64	+0.3
5,417,599	-		Pf6N2E2_4683	0.64	-1.5
5,417,599	-		Pf6N2E2_4683	0.64	-0.4
5,417,699	+		Pf6N2E2_4683	0.75	-1.1
5,417,699	+		Pf6N2E2_4683	0.75	+0.5
5,417,699	+		Pf6N2E2_4683	0.75	-1.1
5,417,699	+		Pf6N2E2_4683	0.75	-0.6
5,417,699	+		Pf6N2E2_4683	0.75	+0.5
5,417,699	+		Pf6N2E2_4683	0.75	+0.5
5,417,700	-		Pf6N2E2_4683	0.75	+0.5
5,417,733	+		Pf6N2E2_4683	0.78	+0.5
5,417,733	+		Pf6N2E2_4683	0.78	+0.1
5,417,733	+		Pf6N2E2_4683	0.78	+0.5
5,417,733	+		Pf6N2E2_4683	0.78	-1.6
5,417,733	+		Pf6N2E2_4683	0.78	-0.3
5,417,733	+		Pf6N2E2_4683	0.78	+0.5
5,417,733	+		Pf6N2E2_4683	0.78	-0.5
5,417,733	+		Pf6N2E2_4683	0.78	-0.8
5,417,734	-		Pf6N2E2_4683	0.78	-0.1
5,417,734	-		Pf6N2E2_4683	0.78	-0.5
5,417,734	-		Pf6N2E2_4683	0.78	+0.5
5,417,991	-				+0.9
5,418,065	+				-0.3
5,418,065	+				-0.5
5,418,065	+				+0.1
5,418,065	+				-1.8
5,418,065	+				-0.4
5,418,065	+				-1.5
5,418,065	+				+0.5
5,418,065	+				-0.5
5,418,065	+				+1.1
5,418,065	+				+0.5
5,418,065	+				+0.5
5,418,065	+				+0.5
5,418,066	-				-1.1
5,418,066	-				-0.5
5,418,066	-				-1.1
5,418,066	-				+0.5
5,418,066	-				+0.5
5,418,066	-				+0.5
5,418,066	-				+0.5
5,418,066	-				+0.5
5,418,086	+		Pf6N2E2_4684	0.11	-1.5
5,418,087	-		Pf6N2E2_4684	0.12	-2.1
5,418,087	-		Pf6N2E2_4684	0.12	-1.1
5,418,087	-		Pf6N2E2_4684	0.12	+0.5
5,418,107	+		Pf6N2E2_4684	0.21	-0.1
5,418,144	+		Pf6N2E2_4684	0.37	-1.5
5,418,145	-		Pf6N2E2_4684	0.37	+0.5
5,418,177	+		Pf6N2E2_4684	0.51	-0.5
5,418,178	-		Pf6N2E2_4684	0.52	-1.5
5,418,302	+				-0.6
5,418,303	-				+0.5
5,418,686	-		Pf6N2E2_4685	0.23	+0.5
5,418,686	-		Pf6N2E2_4685	0.23	+0.5
5,418,686	-		Pf6N2E2_4685	0.23	-0.5
5,418,686	-		Pf6N2E2_4685	0.23	+0.5
5,418,686	-		Pf6N2E2_4685	0.23	-1.1
5,418,686	-		Pf6N2E2_4685	0.23	-0.5
5,418,789	+		Pf6N2E2_4685	0.31	-0.5
5,418,789	+		Pf6N2E2_4685	0.31	-0.4
5,418,789	+		Pf6N2E2_4685	0.31	+0.5
5,418,789	+		Pf6N2E2_4685	0.31	+0.5
5,418,789	+		Pf6N2E2_4685	0.31	-1.2
5,418,789	+		Pf6N2E2_4685	0.31	-0.5
5,418,789	+		Pf6N2E2_4685	0.31	+0.5
5,418,789	+		Pf6N2E2_4685	0.31	+0.5
5,418,789	+		Pf6N2E2_4685	0.31	-0.2
5,418,789	+		Pf6N2E2_4685	0.31	-0.6
5,418,790	-		Pf6N2E2_4685	0.31	+0.5
5,418,790	-		Pf6N2E2_4685	0.31	-0.1
5,418,790	-		Pf6N2E2_4685	0.31	+0.5
5,418,790	-		Pf6N2E2_4685	0.31	+0.5
5,418,790	-		Pf6N2E2_4685	0.31	-0.5
5,418,790	-		Pf6N2E2_4685	0.31	-0.5
5,418,790	-		Pf6N2E2_4685	0.31	-0.5
5,418,790	-		Pf6N2E2_4685	0.31	+1.5
5,418,790	-		Pf6N2E2_4685	0.31	+0.5
5,418,790	-		Pf6N2E2_4685	0.31	-0.5
5,418,792	+		Pf6N2E2_4685	0.31	-0.5
5,418,792	+		Pf6N2E2_4685	0.31	+0.5
5,418,792	+		Pf6N2E2_4685	0.31	-0.1
5,418,792	+		Pf6N2E2_4685	0.31	+0.5
5,418,793	-		Pf6N2E2_4685	0.31	+0.5
5,418,873	+		Pf6N2E2_4685	0.37	-0.3
5,418,873	+		Pf6N2E2_4685	0.37	+0.5
5,418,873	+		Pf6N2E2_4685	0.37	+0.5
5,418,873	+		Pf6N2E2_4685	0.37	-0.5
5,418,874	-		Pf6N2E2_4685	0.37	+0.5
5,419,269	+		Pf6N2E2_4685	0.66	-0.5
5,419,269	+		Pf6N2E2_4685	0.66	+0.5
5,419,270	-		Pf6N2E2_4685	0.66	-0.1
5,419,270	-		Pf6N2E2_4685	0.66	+0.5