Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4326

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
5,045,807	+				-1.0
5,045,841	+				-1.0
5,045,841	+				-0.4
5,045,841	+				-1.4
5,045,842	-				-1.0
5,045,842	-				-0.5
5,045,842	-				-1.5
5,045,842	-				-1.0
5,045,889	-				+0.6
5,045,945	+				-0.4
5,045,945	+				-0.0
5,045,945	+				+0.6
5,045,945	+				-0.4
5,045,945	+				-0.4
5,045,946	-				-0.4
5,045,946	-				-0.4
5,045,946	-				-0.4
5,045,946	-				-0.0
5,045,946	-				+0.6
5,045,946	-				+0.6
5,045,946	-				-1.4
5,045,949	+				-1.0
5,045,949	+				-0.4
5,045,949	+				+0.6
5,045,950	-				-1.9
5,045,950	-				+0.6
5,045,989	+				+0.2
5,045,989	+				-0.0
5,045,989	+				+0.6
5,045,990	-				+0.6
5,046,096	+				+0.6
5,046,096	+				-1.0
5,046,097	-				+0.6
5,046,138	-				+0.6
5,046,469	+				-0.4
5,046,470	-				+0.6
5,046,470	-				-1.4
5,046,470	-				+0.6
5,046,473	+				+0.6
5,046,473	+				-1.0
5,046,473	+				-0.4
5,046,474	-				-1.0
5,046,495	-				-1.8
5,046,497	+				+0.6
5,046,497	+				-0.3
5,046,498	-				-0.4
5,046,574	+		Pf6N2E2_4326	0.13	+0.6
5,046,575	-		Pf6N2E2_4326	0.13	+0.6
5,046,575	-		Pf6N2E2_4326	0.13	-0.4
5,046,881	-		Pf6N2E2_4326	0.29	-0.4
5,046,904	+		Pf6N2E2_4326	0.30	+0.6
5,046,904	+		Pf6N2E2_4326	0.30	-1.0
5,047,286	-		Pf6N2E2_4326	0.50	+0.6
5,047,286	-		Pf6N2E2_4326	0.50	-1.0
5,047,286	-		Pf6N2E2_4326	0.50	-0.4
5,047,286	-		Pf6N2E2_4326	0.50	+1.6
5,047,310	-		Pf6N2E2_4326	0.51	-0.4
5,047,310	-		Pf6N2E2_4326	0.51	+0.6
5,047,441	+		Pf6N2E2_4326	0.58	+0.6
5,047,442	-		Pf6N2E2_4326	0.58	-0.5
5,047,468	+		Pf6N2E2_4326	0.59	-0.5
5,047,468	+		Pf6N2E2_4326	0.59	-1.8
5,047,468	+		Pf6N2E2_4326	0.59	-1.0
5,047,468	+		Pf6N2E2_4326	0.59	-0.8
5,047,468	+		Pf6N2E2_4326	0.59	-0.4
5,047,468	+		Pf6N2E2_4326	0.59	+0.6
5,047,468	+		Pf6N2E2_4326	0.59	-0.4
5,047,468	+		Pf6N2E2_4326	0.59	-1.0
5,047,469	-		Pf6N2E2_4326	0.59	-0.4
5,047,469	-		Pf6N2E2_4326	0.59	+0.6
5,047,469	-		Pf6N2E2_4326	0.59	-1.4
5,047,469	-		Pf6N2E2_4326	0.59	-0.0
5,047,469	-		Pf6N2E2_4326	0.59	-1.0
5,047,469	-		Pf6N2E2_4326	0.59	-0.4
5,047,469	-		Pf6N2E2_4326	0.59	-0.1
5,047,469	-		Pf6N2E2_4326	0.59	+0.6
5,047,469	-		Pf6N2E2_4326	0.59	-0.1
5,047,568	-		Pf6N2E2_4326	0.64	-0.4
5,047,625	+		Pf6N2E2_4326	0.67	+0.2
5,047,625	+		Pf6N2E2_4326	0.67	+0.6
5,047,626	-		Pf6N2E2_4326	0.67	+0.6
5,047,626	-		Pf6N2E2_4326	0.67	-0.4
5,047,661	-		Pf6N2E2_4326	0.69	+0.6
5,047,663	+		Pf6N2E2_4326	0.69	-0.6
5,047,663	+		Pf6N2E2_4326	0.69	-0.4
5,047,663	+		Pf6N2E2_4326	0.69	-0.4
5,047,757	-		Pf6N2E2_4326	0.74	+0.6
5,047,757	-		Pf6N2E2_4326	0.74	+0.6
5,047,760	-		Pf6N2E2_4326	0.74	-0.5
5,047,760	-		Pf6N2E2_4326	0.74	+0.3
5,047,813	+		Pf6N2E2_4326	0.77	-2.4
5,047,825	+		Pf6N2E2_4326	0.77	-0.6
5,047,825	+		Pf6N2E2_4326	0.77	-0.3
5,047,840	+		Pf6N2E2_4326	0.78	+0.6
5,048,149	+				-0.4
5,048,256	+				+0.6
5,048,279	+				+0.6
5,048,336	+				-1.0
5,048,336	+				+0.6
5,048,442	+				-0.8
5,048,443	-				+0.6
5,048,724	+		Pf6N2E2_4327	0.11	-0.5
5,048,725	-		Pf6N2E2_4327	0.11	+0.6
5,049,012	+		Pf6N2E2_4327	0.22	+0.6
5,049,013	-		Pf6N2E2_4327	0.22	-0.7
5,049,066	+		Pf6N2E2_4327	0.24	-1.4
5,049,066	+		Pf6N2E2_4327	0.24	-0.4
5,049,156	+		Pf6N2E2_4327	0.27	-1.0
5,049,156	+		Pf6N2E2_4327	0.27	-1.4
5,049,156	+		Pf6N2E2_4327	0.27	-1.0
5,049,157	-		Pf6N2E2_4327	0.27	-1.4
5,049,157	-		Pf6N2E2_4327	0.27	+0.6