Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4188

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
4,872,238	+				+0.5
4,872,307	-				-1.7
4,872,360	+				-2.2
4,872,361	-				-2.3
4,872,384	+				-2.6
4,872,438	+		Pf6N2E2_4187	0.15	-2.4
4,872,438	+		Pf6N2E2_4187	0.15	-2.4
4,872,438	+		Pf6N2E2_4187	0.15	-2.9
4,872,438	+				-2.4
4,872,438	+		Pf6N2E2_4187	0.15	-2.4
4,872,438	+		Pf6N2E2_4187	0.15	-2.2
4,872,439	-		Pf6N2E2_4187	0.15	-2.7
4,872,439	-		Pf6N2E2_4187	0.15	-2.5
4,872,439	-		Pf6N2E2_4187	0.15	-2.2
4,872,439	-		Pf6N2E2_4187	0.15	-2.4
4,872,439	-		Pf6N2E2_4187	0.15	-2.0
4,872,439	-		Pf6N2E2_4187	0.15	-2.3
4,872,798	+		Pf6N2E2_4187	0.56	-2.6
4,872,799	-		Pf6N2E2_4187	0.56	-2.4
4,872,799	-		Pf6N2E2_4187	0.56	-2.8
4,873,206	+				-2.0
4,873,207	-				+0.5
4,873,207	-				-1.0
4,873,315	+		Pf6N2E2_4188	0.16	+0.5
4,873,437	-		Pf6N2E2_4188	0.39	-2.5
4,873,609	+		Pf6N2E2_4188	0.72	+0.5
4,873,610	-		Pf6N2E2_4188	0.73	-0.5
4,873,744	+				-0.5
4,873,744	+				-1.0
4,873,745	-				-1.0
4,873,753	+				+0.5
4,873,754	-				-0.8
4,873,754	-				+0.5
4,873,754	-				+0.5
4,873,791	-				+0.5
4,873,791	-				-2.0
4,873,791	-				-0.5