Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4072

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
4,746,491	+				-1.5
4,746,492	-				+0.5
4,746,618	+				+0.5
4,746,618	+				-2.3
4,746,618	+				-0.1
4,746,618	+				-1.8
4,746,618	+				-0.5
4,746,618	+				-0.5
4,746,618	+				-1.5
4,746,618	+				-0.9
4,746,618	+				-0.5
4,746,618	+				+0.5
4,746,618	+				-0.5
4,746,618	+				+0.5
4,746,618	+				-1.1
4,746,619	-				-0.5
4,746,619	-				-1.1
4,746,619	-				-0.5
4,746,619	-				+0.1
4,746,619	-				-1.3
4,746,619	-				-0.2
4,746,619	-				-1.1
4,746,622	+				-0.8
4,746,646	+				+0.5
4,746,646	+				-1.8
4,746,647	-				-0.5
4,746,729	+		Pf6N2E2_4071	0.15	+0.5
4,746,729	+		Pf6N2E2_4071	0.15	+0.5
4,746,729	+		Pf6N2E2_4071	0.15	-0.5
4,746,729	+		Pf6N2E2_4071	0.15	-1.1
4,746,730	-		Pf6N2E2_4071	0.15	+0.5
4,746,730	-		Pf6N2E2_4071	0.15	+0.5
4,746,730	-		Pf6N2E2_4071	0.15	-0.5
4,746,730	-		Pf6N2E2_4071	0.15	-0.5
4,747,412	+				+0.5
4,747,412	+				+0.5
4,747,445	-				+0.5
4,747,456	-				-0.8
4,747,456	-				-0.9
4,747,588	+		Pf6N2E2_4072	0.12	-1.3
4,747,588	+		Pf6N2E2_4072	0.12	+0.5
4,747,589	-		Pf6N2E2_4072	0.12	-2.0
4,747,589	-		Pf6N2E2_4072	0.12	+0.5
4,747,589	-		Pf6N2E2_4072	0.12	-2.2
4,747,589	-		Pf6N2E2_4072	0.12	-3.0
4,747,589	-		Pf6N2E2_4072	0.12	-2.2
4,747,675	+		Pf6N2E2_4072	0.22	+0.5
4,747,675	+		Pf6N2E2_4072	0.22	-1.4
4,747,676	-		Pf6N2E2_4072	0.22	+0.5
4,747,676	-		Pf6N2E2_4072	0.22	-1.7
4,747,927	+		Pf6N2E2_4072	0.52	-2.3
4,747,927	+		Pf6N2E2_4072	0.52	+0.5
4,748,185	+		Pf6N2E2_4072	0.83	-2.2
4,748,206	+		Pf6N2E2_4072	0.86	-2.4
4,748,206	+		Pf6N2E2_4072	0.86	-4.0
4,748,207	-		Pf6N2E2_4072	0.86	-1.1
4,748,306	+				-2.1
4,748,307	-				+0.5
4,748,307	-				-2.1
4,748,307	-				-1.2
4,748,342	-				+0.5
4,748,342	-				-2.1
4,748,355	+				-2.3
4,748,355	+				-0.6
4,748,356	-				-0.5
4,748,392	-				-0.9
4,748,392	-				+0.5
4,748,392	-				-0.9
4,748,392	-				-0.5
4,748,392	-				-0.0
4,748,419	+				-0.3
4,748,419	+				-1.5
4,748,419	+				-1.3
4,748,420	-				-1.2
4,748,420	-				-1.2
4,748,420	-				+0.5
4,748,423	+				+0.5
4,748,423	+				-2.1
4,748,424	-				-0.3
4,748,437	+				-1.6
4,748,438	-				-0.5
4,748,438	-				+0.5
4,748,438	-				-0.1
4,748,438	-				-0.5
4,748,522	-				-0.5
4,748,522	-				-1.0
4,748,572	+				-1.9
4,748,572	+				-2.2
4,748,572	+				+0.5
4,748,572	+				-1.6
4,748,572	+				-1.5
4,748,573	-				-0.7
4,748,573	-				+0.5
4,748,573	-				-0.7
4,748,573	-				-0.8
4,748,573	-				-0.1
4,748,573	-				-0.1
4,748,573	-				-0.7
4,748,573	-				-1.5
4,748,573	-				+0.5
4,748,573	-				-1.3
4,748,577	-				-0.9
4,748,577	-				+0.5
4,748,577	-				-1.5
4,748,577	-				+0.5
4,748,577	-				-0.5
4,748,577	-				-2.5
4,748,618	-		Pf6N2E2_4073	0.12	-0.6
4,748,618	-		Pf6N2E2_4073	0.12	-2.3
4,748,624	-		Pf6N2E2_4073	0.12	-0.9
4,748,624	-		Pf6N2E2_4073	0.12	-1.0
4,748,667	+		Pf6N2E2_4073	0.15	+0.5
4,748,668	-		Pf6N2E2_4073	0.15	+0.5
4,748,977	+		Pf6N2E2_4073	0.33	-1.5
4,748,978	-		Pf6N2E2_4073	0.34	-1.1
4,748,978	-		Pf6N2E2_4073	0.34	-0.6
4,748,978	-		Pf6N2E2_4073	0.34	-1.8
4,749,008	-		Pf6N2E2_4073	0.35	-0.9
4,749,008	-		Pf6N2E2_4073	0.35	-1.1
4,749,095	-		Pf6N2E2_4073	0.41	+0.5
4,749,241	+		Pf6N2E2_4073	0.49	-2.2
4,749,242	-		Pf6N2E2_4073	0.49	-0.5
4,749,242	-		Pf6N2E2_4073	0.49	-0.1
4,749,283	+		Pf6N2E2_4073	0.52	-2.9