Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3797

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
4,422,466	+		Pf6N2E2_3796	0.24	+0.5
4,422,466	+		Pf6N2E2_3796	0.24	-0.8
4,422,467	-		Pf6N2E2_3796	0.24	-0.5
4,422,517	+		Pf6N2E2_3796	0.29	+0.5
4,422,517	+		Pf6N2E2_3796	0.29	-0.3
4,422,517	+		Pf6N2E2_3796	0.29	+0.5
4,422,518	-		Pf6N2E2_3796	0.29	-0.3
4,422,518	-		Pf6N2E2_3796	0.29	+0.5
4,422,518	-		Pf6N2E2_3796	0.29	-1.0
4,422,541	+		Pf6N2E2_3796	0.32	+0.1
4,422,541	+		Pf6N2E2_3796	0.32	-1.1
4,422,541	+		Pf6N2E2_3796	0.32	+0.5
4,422,541	+		Pf6N2E2_3796	0.32	-0.5
4,422,541	+		Pf6N2E2_3796	0.32	-0.5
4,422,745	+		Pf6N2E2_3796	0.53	+0.5
4,422,746	-		Pf6N2E2_3796	0.53	-0.5
4,422,746	-		Pf6N2E2_3796	0.53	+2.5
4,422,746	-		Pf6N2E2_3796	0.53	-1.3
4,422,817	+		Pf6N2E2_3796	0.61	-0.7
4,422,817	+		Pf6N2E2_3796	0.61	-0.5
4,422,817	+		Pf6N2E2_3796	0.61	-0.5
4,422,817	+		Pf6N2E2_3796	0.61	+0.5
4,422,870	+		Pf6N2E2_3796	0.66	-0.7
4,422,871	-		Pf6N2E2_3796	0.67	-0.5
4,422,871	-		Pf6N2E2_3796	0.67	+0.5
4,422,931	+		Pf6N2E2_3796	0.73	+0.5
4,423,219	+				+0.5
4,423,219	+				-0.5
4,423,220	-				-1.0
4,423,220	-				-1.0
4,423,220	-				+0.5
4,423,220	-				-0.0
4,423,220	-				-0.5
4,423,459	+				-0.5
4,423,459	+				+0.5
4,423,459	+				-0.7
4,423,459	+				-0.0
4,423,460	-				+0.5
4,423,460	-				+0.5
4,423,460	-				-0.5
4,423,460	-				-0.0
4,423,460	-				-0.4
4,423,460	-				-1.0
4,423,460	-				+0.5
4,423,460	-				-0.5
4,423,540	+		Pf6N2E2_3797	0.11	-1.5
4,423,540	+		Pf6N2E2_3797	0.11	-0.5
4,423,555	+		Pf6N2E2_3797	0.13	-0.5
4,423,555	+		Pf6N2E2_3797	0.13	-0.5
4,423,555	+		Pf6N2E2_3797	0.13	-0.5
4,423,555	+		Pf6N2E2_3797	0.13	-0.5
4,423,556	-		Pf6N2E2_3797	0.13	-0.5
4,423,556	-		Pf6N2E2_3797	0.13	-1.2
4,423,556	-		Pf6N2E2_3797	0.13	+0.5
4,423,567	+		Pf6N2E2_3797	0.15	+0.5
4,423,567	+		Pf6N2E2_3797	0.15	-2.3
4,423,567	+		Pf6N2E2_3797	0.15	-1.9
4,423,567	+		Pf6N2E2_3797	0.15	-0.5
4,423,567	+		Pf6N2E2_3797	0.15	-1.0
4,423,568	-		Pf6N2E2_3797	0.15	+0.5
4,423,568	-		Pf6N2E2_3797	0.15	-1.3
4,423,624	+		Pf6N2E2_3797	0.22	-0.8
4,423,635	-		Pf6N2E2_3797	0.23	-0.9
4,423,832	-		Pf6N2E2_3797	0.48	-2.7
4,423,883	-		Pf6N2E2_3797	0.54	-1.8
4,423,906	+		Pf6N2E2_3797	0.57	-0.5
4,423,906	+		Pf6N2E2_3797	0.57	-1.0
4,423,907	-		Pf6N2E2_3797	0.57	-1.0
4,423,907	-		Pf6N2E2_3797	0.57	-0.5
4,424,005	+		Pf6N2E2_3797	0.69	-2.0
4,424,005	+		Pf6N2E2_3797	0.69	-0.5
4,424,005	+		Pf6N2E2_3797	0.69	-1.0
4,424,005	+		Pf6N2E2_3797	0.69	-0.5
4,424,101	+		Pf6N2E2_3797	0.81	-0.5
4,424,102	-		Pf6N2E2_3797	0.81	+0.5
4,424,102	-		Pf6N2E2_3797	0.81	+0.5
4,424,322	+				+0.5
4,424,323	-				-2.5
4,424,476	+		Pf6N2E2_3798	0.18	-0.8
4,424,476	+		Pf6N2E2_3798	0.18	-0.8
4,424,476	+		Pf6N2E2_3798	0.18	+0.5
4,424,477	-		Pf6N2E2_3798	0.18	+0.5
4,424,477	-		Pf6N2E2_3798	0.18	+0.5
4,424,477	-		Pf6N2E2_3798	0.18	-0.5
4,424,477	-		Pf6N2E2_3798	0.18	-0.5
4,424,477	-		Pf6N2E2_3798	0.18	-2.4
4,424,611	-		Pf6N2E2_3798	0.29	-0.5
4,424,835	+		Pf6N2E2_3798	0.47	+0.5
4,424,916	+		Pf6N2E2_3798	0.54	-0.5
4,424,916	+		Pf6N2E2_3798	0.54	+0.5
4,424,916	+		Pf6N2E2_3798	0.54	-0.5
4,424,916	+		Pf6N2E2_3798	0.54	+0.5
4,424,917	-		Pf6N2E2_3798	0.54	-1.8
4,424,917	-		Pf6N2E2_3798	0.54	-1.0
4,424,938	-		Pf6N2E2_3798	0.56	-1.0
4,424,938	-		Pf6N2E2_3798	0.56	+0.5
4,424,979	-		Pf6N2E2_3798	0.59	-0.9