Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3789

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
4,410,541	+				-0.3
4,410,541	+				-0.5
4,410,542	-				-0.0
4,410,542	-				-1.0
4,410,542	-				+0.5
4,410,559	-				-0.5
4,410,573	+				+0.5
4,410,573	+				+0.5
4,410,574	-				-1.5
4,410,574	-				-0.5
4,410,577	-				-0.5
4,410,577	-				-1.0
4,410,624	+				+1.0
4,410,636	+				+0.5
4,410,636	+				-0.5
4,410,636	+				+0.5
4,410,636	+				-0.6
4,410,636	+				+0.5
4,410,637	-				-0.8
4,410,637	-				+0.5
4,410,637	-				+0.5
4,410,637	-				-0.5
4,410,637	-				-1.0
4,410,637	-				+0.5
4,410,637	-				-1.5
4,410,637	-				-0.4
4,410,643	+				-0.5
4,410,644	-				+0.5
4,410,669	+				-1.5
4,410,669	+				+0.5
4,410,670	-				-1.5
4,410,670	-				+0.5
4,410,670	-				+0.5
4,410,683	+				-0.5
4,410,704	+				-1.8
4,410,705	-				+0.3
4,410,724	+				+0.3
4,410,724	+				-0.2
4,410,724	+				+0.5
4,410,725	-				-0.9
4,410,728	+				+0.5
4,410,728	+				-1.0
4,410,728	+				-1.0
4,410,729	-				+0.3
4,410,729	-				+0.5
4,410,729	-				-1.0
4,410,729	-				-0.4
4,410,729	-				-0.5
4,410,729	-				+0.5
4,410,733	+				+1.5
4,410,733	+				-0.5
4,410,733	+				+0.5
4,410,734	-				-0.5
4,410,734	-				+0.5
4,410,734	-				-0.5
4,410,734	-				+0.5
4,410,906	+		Pf6N2E2_3789	0.10	+0.5
4,410,907	-		Pf6N2E2_3789	0.10	-2.0
4,410,907	-		Pf6N2E2_3789	0.10	-0.5
4,410,907	-		Pf6N2E2_3789	0.10	-1.0
4,410,907	-		Pf6N2E2_3789	0.10	-0.3
4,410,907	-		Pf6N2E2_3789	0.10	-1.5
4,410,907	-		Pf6N2E2_3789	0.10	+0.5
4,410,907	-		Pf6N2E2_3789	0.10	+0.5
4,411,054	-		Pf6N2E2_3789	0.18	-0.3
4,411,160	-		Pf6N2E2_3789	0.24	-0.5
4,411,243	-		Pf6N2E2_3789	0.28	+0.5
4,411,257	+		Pf6N2E2_3789	0.29	+0.5
4,411,259	+		Pf6N2E2_3789	0.29	-0.5
4,411,259	+		Pf6N2E2_3789	0.29	+0.1
4,411,259	+		Pf6N2E2_3789	0.29	+0.1
4,411,260	-		Pf6N2E2_3789	0.29	+0.5
4,411,260	-		Pf6N2E2_3789	0.29	+0.2
4,411,260	-		Pf6N2E2_3789	0.29	+0.5
4,411,260	-		Pf6N2E2_3789	0.29	-0.4
4,411,260	-		Pf6N2E2_3789	0.29	+0.5
4,411,260	-		Pf6N2E2_3789	0.29	-1.0
4,411,263	+		Pf6N2E2_3789	0.29	-0.5
4,411,264	-		Pf6N2E2_3789	0.29	+0.5
4,411,264	-		Pf6N2E2_3789	0.29	-0.2
4,411,264	-		Pf6N2E2_3789	0.29	-0.3
4,411,264	-		Pf6N2E2_3789	0.29	-0.5
4,411,264	-		Pf6N2E2_3789	0.29	-0.0
4,411,264	-		Pf6N2E2_3789	0.29	-2.0
4,411,264	-		Pf6N2E2_3789	0.29	-0.5
4,411,401	+		Pf6N2E2_3789	0.36	+0.5
4,411,483	+		Pf6N2E2_3789	0.41	-0.5
4,411,483	+		Pf6N2E2_3789	0.41	-0.1
4,411,483	+		Pf6N2E2_3789	0.41	-0.5
4,411,483	+		Pf6N2E2_3789	0.41	-0.5
4,411,484	-		Pf6N2E2_3789	0.41	+0.1
4,411,484	-		Pf6N2E2_3789	0.41	-1.0
4,411,484	-		Pf6N2E2_3789	0.41	+0.5
4,411,484	-		Pf6N2E2_3789	0.41	+0.5
4,411,579	+		Pf6N2E2_3789	0.46	-1.3
4,411,732	+		Pf6N2E2_3789	0.54	-0.5
4,411,732	+		Pf6N2E2_3789	0.54	+0.5
4,411,732	+		Pf6N2E2_3789	0.54	+0.5
4,411,733	-		Pf6N2E2_3789	0.54	+0.5
4,411,733	-		Pf6N2E2_3789	0.54	+0.5
4,411,843	+		Pf6N2E2_3789	0.59	-1.5
4,412,055	-		Pf6N2E2_3789	0.71	-0.5
4,412,055	-		Pf6N2E2_3789	0.71	+0.5
4,412,055	-		Pf6N2E2_3789	0.71	-0.5
4,412,402	+		Pf6N2E2_3789	0.89	+1.5
4,412,402	+		Pf6N2E2_3789	0.89	-0.9
4,412,402	+		Pf6N2E2_3789	0.89	+0.3
4,412,402	+		Pf6N2E2_3789	0.89	-0.4
4,412,403	-		Pf6N2E2_3789	0.89	-0.5
4,412,403	-		Pf6N2E2_3789	0.89	-0.5
4,412,486	+				-1.0
4,412,640	+				-0.5
4,412,640	+				+0.5
4,412,640	+				+0.5
4,412,640	+				-0.3
4,412,640	+				-0.5
4,412,640	+				+0.5
4,412,640	+				-0.5
4,412,640	+				-1.5
4,412,640	+				-0.2
4,412,640	+				+0.5
4,412,641	-				+0.5
4,412,641	-				+0.5
4,412,641	-				+0.5
4,412,641	-				+0.5
4,412,641	-				+0.5
4,412,641	-				-1.0
4,412,641	-				-1.0
4,412,641	-				+0.5
4,412,641	-				-0.5
4,412,641	-				-1.4
4,412,668	+				+0.5
4,412,682	+				-1.0
4,412,683	-				-1.0
4,412,713	+				-0.5
4,412,886	+				+0.5
4,412,887	-				+0.5
4,412,887	-				+0.5
4,412,890	+				-0.5
4,412,890	+				+0.5
4,412,890	+				-0.5
4,412,890	+				-0.5
4,412,890	+				-0.5
4,412,890	+				-0.5
4,412,890	+				-1.1
4,412,890	+				+0.5
4,412,890	+				-1.5
4,412,890	+				-0.8
4,412,890	+				+0.3
4,412,890	+				-1.5
4,412,890	+				-1.5
4,412,890	+				+0.5
4,412,890	+				-0.6
4,412,890	+				-2.0
4,412,890	+				+0.5
4,412,890	+				+0.5
4,412,890	+				-0.5
4,412,890	+				-0.5
4,412,890	+				+0.5
4,412,891	-				+0.5
4,412,891	-				+0.5
4,412,891	-				-0.5
4,412,891	-				+0.5
4,412,891	-				+0.5
4,412,891	-				-1.5
4,412,891	-				-1.5
4,412,891	-				+0.5
4,412,891	-				-0.5
4,412,891	-				-0.6
4,412,891	-				-1.0
4,412,891	-				-0.5
4,412,891	-				-1.6
4,412,891	-				+0.5
4,412,891	-				-0.5
4,412,891	-				+0.2
4,412,891	-				+0.5
4,412,891	-				-1.5
4,412,891	-				+0.5
4,412,894	+				-0.7
4,412,895	-				-1.8
4,412,895	-				-0.5
4,412,895	-				+0.5
4,412,895	-				-0.3
4,412,895	-				-0.5
4,412,895	-				-0.5
4,412,895	-				+0.5
4,412,924	+				-0.5
4,412,925	-				+0.5
4,412,925	-				-0.5
4,412,935	+				-0.5
4,412,935	+				-0.5
4,412,936	-				-2.0
4,412,947	+				-0.5
4,412,948	-				+1.1
4,413,035	+				-0.5
4,413,035	+				-0.5
4,413,035	+				-0.5
4,413,035	+				-0.6
4,413,035	+				+0.5
4,413,036	-				-0.5
4,413,036	-				-1.0
4,413,036	-				+0.5
4,413,158	+				+0.5
4,413,286	+				-0.5
4,413,287	-				+0.5
4,413,287	-				+0.5
4,413,441	-				-1.0
4,413,441	-				-0.8
4,413,519	-				+0.5
4,413,519	-				+0.5
4,413,569	+				+0.5