Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3603

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
4,194,083	+				+0.5
4,194,158	-		Pf6N2E2_3602	0.17	+0.5
4,194,444	-		Pf6N2E2_3602	0.81	+0.5
4,194,678	-		Pf6N2E2_3603	0.15	+0.5
4,194,678	-		Pf6N2E2_3603	0.15	+0.5
4,194,678	-		Pf6N2E2_3603	0.15	-2.3
4,194,678	-		Pf6N2E2_3603	0.15	+0.5
4,194,678	-		Pf6N2E2_3603	0.15	-5.3
4,194,678	-		Pf6N2E2_3603	0.15	-1.0
4,194,678	-		Pf6N2E2_3603	0.15	+0.5
4,194,678	-		Pf6N2E2_3603	0.15	+0.5
4,194,678	-		Pf6N2E2_3603	0.15	+0.5
4,194,678	-		Pf6N2E2_3603	0.15	-1.0
4,194,678	-		Pf6N2E2_3603	0.15	-6.2
4,194,678	-		Pf6N2E2_3603	0.15	-0.5
4,194,678	-		Pf6N2E2_3603	0.15	+0.5
4,194,678	-		Pf6N2E2_3603	0.15	+0.5
4,194,680	-		Pf6N2E2_3603	0.15	+0.5
4,194,897	-		Pf6N2E2_3603	0.39	+0.5
4,194,897	-		Pf6N2E2_3603	0.39	+0.5
4,194,897	-		Pf6N2E2_3603	0.39	-1.0
4,195,106	-		Pf6N2E2_3603	0.63	-0.5
4,196,251	-				-1.8
4,196,251	-				+0.5
4,196,323	-				+0.5
4,196,418	+				+0.5
4,196,418	+				-1.8
4,196,419	-				-1.0
4,196,419	-				-0.5