Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3451

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
4,018,085	-		Pf6N2E2_3449	0.57	-0.3
4,018,129	+		Pf6N2E2_3449	0.62	+0.4
4,018,158	+		Pf6N2E2_3449	0.65	+0.8
4,018,158	+		Pf6N2E2_3449	0.65	-0.6
4,018,159	-		Pf6N2E2_3449	0.65	+0.4
4,018,159	-		Pf6N2E2_3449	0.65	-0.5
4,018,159	-		Pf6N2E2_3449	0.65	-1.1
4,018,159	-		Pf6N2E2_3449	0.65	+0.4
4,018,159	-		Pf6N2E2_3449	0.65	-1.1
4,018,159	-		Pf6N2E2_3449	0.65	-1.6
4,018,229	+		Pf6N2E2_3449	0.73	+0.4
4,018,229	+		Pf6N2E2_3449	0.73	+0.4
4,018,229	+		Pf6N2E2_3449	0.73	-1.6
4,018,229	+		Pf6N2E2_3449	0.73	-0.3
4,018,230	-		Pf6N2E2_3449	0.73	-0.4
4,018,230	-		Pf6N2E2_3449	0.73	+0.7
4,018,230	-		Pf6N2E2_3449	0.73	-0.6
4,018,230	-		Pf6N2E2_3449	0.73	+0.4
4,018,230	-		Pf6N2E2_3449	0.73	-0.6
4,018,230	-		Pf6N2E2_3449	0.73	-0.6
4,018,230	-		Pf6N2E2_3449	0.73	+0.4
4,018,230	-		Pf6N2E2_3449	0.73	+0.4
4,018,230	-		Pf6N2E2_3449	0.73	+0.4
4,018,274	+		Pf6N2E2_3449	0.78	-0.8
4,018,274	+		Pf6N2E2_3449	0.78	-0.6
4,018,275	-		Pf6N2E2_3449	0.79	+0.4
4,018,275	-		Pf6N2E2_3449	0.79	-0.3
4,018,275	-		Pf6N2E2_3449	0.79	-0.6
4,018,347	+		Pf6N2E2_3449	0.87	-0.6
4,018,347	+		Pf6N2E2_3449	0.87	-1.6
4,018,347	+		Pf6N2E2_3449	0.87	+0.4
4,018,348	-		Pf6N2E2_3449	0.87	-0.5
4,018,348	-		Pf6N2E2_3449	0.87	-0.6
4,018,503	+				-1.0
4,018,503	+				-0.6
4,018,503	+				-1.1
4,018,669	+		Pf6N2E2_3450	0.31	-0.6
4,018,669	+		Pf6N2E2_3450	0.31	-0.4
4,018,670	-		Pf6N2E2_3450	0.32	-0.5
4,018,670	-		Pf6N2E2_3450	0.32	-0.6
4,018,729	+		Pf6N2E2_3450	0.49	-0.3
4,018,729	+		Pf6N2E2_3450	0.49	+0.4
4,018,730	-		Pf6N2E2_3450	0.49	+0.4
4,018,730	-		Pf6N2E2_3450	0.49	+0.8
4,018,739	-		Pf6N2E2_3450	0.52	-0.4
4,018,754	-		Pf6N2E2_3450	0.56	-1.1
4,018,754	-		Pf6N2E2_3450	0.56	+0.4
4,018,774	+		Pf6N2E2_3450	0.62	-1.1
4,018,888	+				-0.7
4,019,059	+				-0.6
4,019,059	+				-0.6
4,019,059	+				-1.0
4,019,059	+				-1.0
4,019,059	+				-0.6
4,019,059	+				-0.6
4,019,059	+				+0.4
4,019,059	+				-1.1
4,019,059	+				+0.4
4,019,059	+				-1.1
4,019,059	+				-0.7
4,019,060	-				+0.4
4,019,060	-				-0.6
4,019,060	-				-0.6
4,019,060	-				-0.9
4,019,060	-				-1.1
4,019,060	-				-2.6
4,019,062	+				-1.6
4,019,062	+				+0.4
4,019,062	+				+0.4
4,019,063	-				-1.0
4,019,063	-				-0.9
4,019,115	+				+0.4
4,019,115	+				-2.1
4,019,115	+				+0.4
4,019,115	+				+0.4
4,019,116	-				-1.6
4,019,116	-				-0.6
4,019,225	-		Pf6N2E2_3451	0.21	-0.6
4,019,225	-		Pf6N2E2_3451	0.21	-0.8
4,019,225	-		Pf6N2E2_3451	0.21	-2.0
4,019,274	+		Pf6N2E2_3451	0.26	-1.0
4,019,274	+		Pf6N2E2_3451	0.26	-0.8
4,019,274	+		Pf6N2E2_3451	0.26	-0.6
4,019,274	+		Pf6N2E2_3451	0.26	-1.1
4,019,274	+		Pf6N2E2_3451	0.26	-0.8
4,019,274	+		Pf6N2E2_3451	0.26	-0.6
4,019,275	-		Pf6N2E2_3451	0.27	-0.9
4,019,275	-		Pf6N2E2_3451	0.27	-1.6
4,019,275	-		Pf6N2E2_3451	0.27	-0.6
4,019,275	-		Pf6N2E2_3451	0.27	-0.8
4,019,537	-		Pf6N2E2_3451	0.56	+0.4
4,019,678	-		Pf6N2E2_3451	0.72	-1.1
4,019,911	+				+0.4
4,019,911	+				+0.4
4,019,912	-				+0.4
4,019,912	-				-0.6
4,020,022	+				+0.4
4,020,022	+				-0.8
4,020,047	-				-0.6
4,020,299	-		Pf6N2E2_3452	0.24	-0.6
4,020,299	-		Pf6N2E2_3452	0.24	-0.6
4,020,299	-		Pf6N2E2_3452	0.24	+0.0
4,020,730	+		Pf6N2E2_3452	0.52	+0.4
4,020,730	+		Pf6N2E2_3452	0.52	-0.7
4,020,730	+		Pf6N2E2_3452	0.52	+0.4
4,020,730	+		Pf6N2E2_3452	0.52	-2.0
4,020,730	+		Pf6N2E2_3452	0.52	-0.6
4,020,730	+		Pf6N2E2_3452	0.52	+0.9
4,020,730	+		Pf6N2E2_3452	0.52	-0.0
4,020,731	-		Pf6N2E2_3452	0.52	-0.9
4,020,926	+		Pf6N2E2_3452	0.65	-3.0
4,020,926	+		Pf6N2E2_3452	0.65	-0.6
4,020,926	+		Pf6N2E2_3452	0.65	+0.4
4,020,926	+		Pf6N2E2_3452	0.65	+0.4