Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3323

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,843,090	+				-0.6
3,843,091	-				-0.6
3,843,102	-				-1.6
3,843,412	+				+0.4
3,843,412	+				+0.4
3,843,413	-				-1.6
3,843,413	-				-0.6
3,843,422	+				+1.4
3,843,436	-				-1.9
3,843,465	-				-0.6
3,843,465	-				-0.6
3,843,465	-				+0.4
3,843,538	-				+0.4
3,843,569	+				-1.1
3,843,570	-				+0.4
3,843,571	+				+0.4
3,843,571	+				+0.4
3,843,572	-				+0.4
3,843,572	-				+0.4
3,843,572	-				+0.4
3,843,597	-				+0.4
3,843,597	-				-0.6
3,843,597	-				+0.4
3,843,597	-				+0.4
3,843,614	-				-0.3
3,843,614	-				-0.6
3,843,614	-				+0.4
3,843,625	-				-0.6
3,843,690	-				-0.0
3,843,828	+				-0.6
3,843,829	-				+0.4
3,843,848	+				+0.4
3,843,862	+				+0.4
3,843,862	+				+0.1
3,843,862	+				+0.2
3,843,863	-				-1.1
3,843,869	+				-0.6
3,843,909	+				+0.4
3,844,049	+		Pf6N2E2_3323	0.22	-0.6
3,844,049	+		Pf6N2E2_3323	0.22	-1.1
3,844,052	+		Pf6N2E2_3323	0.22	-0.6
3,844,052	+		Pf6N2E2_3323	0.22	+0.4
3,844,318	+		Pf6N2E2_3323	0.59	+0.4
3,844,380	+		Pf6N2E2_3323	0.67	-0.6
3,844,380	+		Pf6N2E2_3323	0.67	+0.4
3,845,014	+				-2.4
3,845,014	+				+0.4
3,845,042	+				+0.4
3,845,238	+				+0.4
3,845,386	+				-1.1