Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3312

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,825,822	+		Pf6N2E2_3311	0.17	-0.6
3,825,832	+		Pf6N2E2_3311	0.18	+0.4
3,825,832	+		Pf6N2E2_3311	0.18	+0.4
3,825,833	-		Pf6N2E2_3311	0.18	+0.4
3,825,842	-		Pf6N2E2_3311	0.19	-0.6
3,825,851	-		Pf6N2E2_3311	0.20	-0.6
3,826,163	-		Pf6N2E2_3311	0.51	-0.5
3,826,342	+		Pf6N2E2_3311	0.69	+0.1
3,826,342	+		Pf6N2E2_3311	0.69	-1.1
3,826,342	+		Pf6N2E2_3311	0.69	-1.1
3,826,343	-		Pf6N2E2_3311	0.69	-0.3
3,826,343	-		Pf6N2E2_3311	0.69	+0.4
3,826,343	-		Pf6N2E2_3311	0.69	-0.5
3,826,343	-		Pf6N2E2_3311	0.69	-0.8
3,826,343	-		Pf6N2E2_3311	0.69	-1.1
3,826,458	-		Pf6N2E2_3311	0.80	+0.4
3,826,544	-		Pf6N2E2_3311	0.89	-0.1
3,826,672	+				+0.4
3,826,672	+				-1.6
3,826,673	-				+0.4
3,827,195	+		Pf6N2E2_3312	0.58	-0.6
3,827,195	+		Pf6N2E2_3312	0.58	-1.9
3,827,195	+		Pf6N2E2_3312	0.58	+0.4
3,827,196	-		Pf6N2E2_3312	0.58	+0.4
3,827,196	-		Pf6N2E2_3312	0.58	-0.6
3,827,243	+		Pf6N2E2_3312	0.63	-1.6
3,827,244	-		Pf6N2E2_3312	0.63	-1.3
3,827,450	+		Pf6N2E2_3312	0.86	+0.4
3,827,451	-		Pf6N2E2_3312	0.86	+0.4
3,827,451	-		Pf6N2E2_3312	0.86	-1.1
3,827,600	-				+0.4
3,827,901	+				+0.4
3,828,033	+		Pf6N2E2_3313	0.46	+0.4
3,828,267	+		Pf6N2E2_3313	0.70	+0.4
3,828,267	+		Pf6N2E2_3313	0.70	+0.7
3,828,267	+		Pf6N2E2_3313	0.70	+0.4
3,828,268	-		Pf6N2E2_3313	0.70	+0.1
3,828,268	-		Pf6N2E2_3313	0.70	+0.4
3,828,331	-		Pf6N2E2_3313	0.77	-0.6
3,828,460	-		Pf6N2E2_3313	0.90	-0.6
3,828,471	-				-0.6
3,828,482	-				-2.4
3,828,532	-				-0.6
3,828,567	+				-0.6
3,828,567	+				+0.4
3,828,567	+				-0.2
3,828,568	-				-0.6
3,828,568	-				-1.1
3,828,568	-				-0.3