Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3283

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,788,590	+		Pf6N2E2_3282	0.76	+0.4
3,789,566	-				+0.4
3,789,566	-				+0.4
3,789,566	-				+0.4
3,789,566	-				-1.1
3,789,581	-				-0.6
3,789,696	-		Pf6N2E2_3283	0.10	-1.1
3,789,696	-		Pf6N2E2_3283	0.10	+0.4
3,789,696	-		Pf6N2E2_3283	0.10	-1.8
3,789,696	-		Pf6N2E2_3283	0.10	-1.9
3,789,696	-		Pf6N2E2_3283	0.10	+0.4
3,789,696	-		Pf6N2E2_3283	0.10	-0.6
3,789,698	-		Pf6N2E2_3283	0.10	-1.3
3,789,698	-		Pf6N2E2_3283	0.10	+0.4
3,789,698	-		Pf6N2E2_3283	0.10	-1.0
3,789,698	-		Pf6N2E2_3283	0.10	+0.4
3,790,238	-		Pf6N2E2_3283	0.47	-1.1
3,790,388	-		Pf6N2E2_3283	0.58	-2.1
3,790,637	-		Pf6N2E2_3283	0.75	-2.1
3,790,637	-		Pf6N2E2_3283	0.75	-1.1
3,790,637	-		Pf6N2E2_3283	0.75	-1.7
3,790,878	-				-1.6
3,790,880	-				-1.0
3,790,880	-				-2.1
3,790,880	-				+0.4
3,790,880	-				+0.4
3,790,884	-				+0.4
3,790,884	-				+0.4
3,790,884	-				-1.6
3,791,091	-				-0.7
3,791,091	-				-0.3
3,791,109	-				+0.1
3,791,109	-				-1.6
3,791,109	-				-1.9
3,791,109	-				+0.4
3,791,152	-		Pf6N2E2_3284	0.15	-0.6
3,791,152	-		Pf6N2E2_3284	0.15	+0.4
3,791,152	-		Pf6N2E2_3284	0.15	+0.4
3,791,198	-		Pf6N2E2_3284	0.23	-1.6
3,791,198	-		Pf6N2E2_3284	0.23	+0.4
3,791,198	-		Pf6N2E2_3284	0.23	+0.4
3,791,342	+		Pf6N2E2_3284	0.47	+0.4
3,791,343	-		Pf6N2E2_3284	0.47	-0.7
3,791,343	-		Pf6N2E2_3284	0.47	-1.1
3,791,343	-		Pf6N2E2_3284	0.47	+0.4
3,791,343	-		Pf6N2E2_3284	0.47	-1.1
3,791,343	-		Pf6N2E2_3284	0.47	-0.6
3,791,527	-		Pf6N2E2_3284	0.78	+0.4
3,791,644	-				-0.7
3,791,644	-				-0.6
3,791,644	-				-0.1
3,791,755	-				-0.6
3,791,804	+				-0.6
3,791,804	+				+0.4
3,791,805	-				-0.1
3,791,805	-				-0.6
3,791,805	-				+0.4
3,791,805	-				-1.1
3,791,805	-				-0.6
3,791,805	-				+0.1
3,791,805	-				-0.8
3,791,805	-				-1.6
3,791,805	-				-1.1
3,791,805	-				+0.1
3,791,805	-				+0.4
3,791,805	-				-0.6
3,791,805	-				-0.7
3,791,805	-				-0.4
3,791,805	-				-1.6
3,791,805	-				-1.1
3,791,805	-				-0.0
3,791,805	-				-1.1
3,791,805	-				+0.7
3,791,823	+				+0.4
3,791,824	-				-0.3
3,791,824	-				-0.6
3,791,828	-				-1.6