Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2773

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,260,517	+				-0.9
3,260,517	+				-0.6
3,260,517	+				-0.6
3,260,517	+				+0.4
3,260,518	-				-0.6
3,260,705	+		Pf6N2E2_2772	0.27	-0.6
3,260,821	+		Pf6N2E2_2772	0.44	-2.8
3,260,821	+		Pf6N2E2_2772	0.44	-0.4
3,260,821	+		Pf6N2E2_2772	0.44	+0.4
3,260,822	-		Pf6N2E2_2772	0.44	-2.6
3,260,822	-		Pf6N2E2_2772	0.44	-0.6
3,260,913	+		Pf6N2E2_2772	0.57	-1.2
3,260,913	+		Pf6N2E2_2772	0.57	+0.4
3,260,913	+		Pf6N2E2_2772	0.57	+0.4
3,260,913	+		Pf6N2E2_2772	0.57	+0.4
3,260,914	-		Pf6N2E2_2772	0.57	+0.4
3,260,914	-		Pf6N2E2_2772	0.57	+0.6
3,260,914	-		Pf6N2E2_2772	0.57	-0.6
3,260,914	-		Pf6N2E2_2772	0.57	+0.4
3,260,917	+		Pf6N2E2_2772	0.58	-0.6
3,261,100	-		Pf6N2E2_2772	0.84	-0.9
3,261,100	-		Pf6N2E2_2772	0.84	+0.0
3,261,111	-		Pf6N2E2_2772	0.86	+0.4
3,261,135	+		Pf6N2E2_2772	0.89	-1.4
3,261,135	+		Pf6N2E2_2772	0.89	-0.6
3,261,135	+		Pf6N2E2_2772	0.89	-1.0
3,261,135	+		Pf6N2E2_2772	0.89	-0.6
3,261,135	+		Pf6N2E2_2772	0.89	+0.4
3,261,136	-		Pf6N2E2_2772	0.89	-0.2
3,261,136	-		Pf6N2E2_2772	0.89	-1.1
3,261,136	-		Pf6N2E2_2772	0.89	+0.4
3,261,136	-		Pf6N2E2_2772	0.89	-0.6
3,261,191	-				-1.5
3,261,251	+				-0.4
3,261,251	+				+0.4
3,261,251	+				-0.0
3,261,252	-				-0.9
3,261,252	-				-1.2
3,261,252	-				+0.4
3,261,252	-				+0.4
3,261,252	-				-3.1
3,261,307	+				-0.6
3,261,308	-				-0.6
3,261,314	+				+0.4
3,261,314	+				-0.4
3,261,315	-				-0.5
3,261,315	-				-0.0
3,261,315	-				+0.4
3,261,503	+		Pf6N2E2_2773	0.15	+0.4
3,261,503	+		Pf6N2E2_2773	0.15	+0.4
3,261,503	+		Pf6N2E2_2773	0.15	-1.0
3,261,561	-		Pf6N2E2_2773	0.20	-1.2
3,261,590	+		Pf6N2E2_2773	0.22	+0.4
3,261,625	+		Pf6N2E2_2773	0.26	-0.6
3,261,652	+		Pf6N2E2_2773	0.28	-1.6
3,261,653	-		Pf6N2E2_2773	0.28	+0.4
3,261,685	+		Pf6N2E2_2773	0.31	+0.4
3,261,685	+		Pf6N2E2_2773	0.31	+0.4
3,261,685	+		Pf6N2E2_2773	0.31	-1.6
3,261,685	+		Pf6N2E2_2773	0.31	+0.4
3,261,685	+		Pf6N2E2_2773	0.31	+0.0
3,261,685	+		Pf6N2E2_2773	0.31	-1.2
3,261,686	-		Pf6N2E2_2773	0.31	+0.4
3,261,686	-		Pf6N2E2_2773	0.31	-1.2
3,261,686	-		Pf6N2E2_2773	0.31	-1.0
3,261,689	+				-1.0
3,261,689	+		Pf6N2E2_2773	0.31	-0.6
3,261,689	+		Pf6N2E2_2773	0.31	+0.4
3,261,690	-		Pf6N2E2_2773	0.31	+0.4
3,261,690	-		Pf6N2E2_2773	0.31	+0.4
3,261,690	-		Pf6N2E2_2773	0.31	+0.4
3,261,727	-		Pf6N2E2_2773	0.35	+0.4
3,262,196	-		Pf6N2E2_2773	0.77	+0.4
3,262,261	+		Pf6N2E2_2773	0.83	+0.4
3,262,261	+		Pf6N2E2_2773	0.83	-2.6
3,262,261	+		Pf6N2E2_2773	0.83	+0.4
3,262,261	+		Pf6N2E2_2773	0.83	+0.4
3,262,261	+		Pf6N2E2_2773	0.83	-1.4
3,262,262	-		Pf6N2E2_2773	0.83	+0.4
3,262,262	-		Pf6N2E2_2773	0.83	+0.4
3,262,262	-		Pf6N2E2_2773	0.83	-1.2
3,262,478	-				+0.4
3,262,492	-				-0.6
3,262,492	-				-0.5
3,262,492	-				-0.1
3,262,696	+				+0.4
3,262,697	-				+0.2
3,262,697	-				-0.4
3,262,700	-				-1.0
3,262,717	+				+0.4
3,262,717	+				-0.6
3,262,717	+				+0.4
3,262,717	+				+0.4
3,262,721	-				+0.4
3,262,721	-				+0.6
3,262,735	+				+0.4
3,262,736	-				-0.6
3,262,756	+				+0.4
3,262,756	+				+0.4
3,262,756	+				-1.6
3,262,757	-				+0.4
3,262,759	+				-1.2
3,262,759	+				-1.6
3,262,777	+				+0.4
3,262,778	-				-0.6
3,262,778	-				-0.1
3,262,778	-				-0.8
3,262,795	+				-0.7
3,262,795	+				+0.4
3,262,795	+				-0.6
3,262,796	-				+0.4
3,262,810	+				+0.4
3,262,810	+				-1.4
3,262,811	-				-0.6
3,262,811	-				+0.4
3,262,811	-				-0.6
3,262,835	-				+0.4
3,262,835	-				+0.4
3,262,835	-				+1.4
3,262,849	+				+0.4
3,262,849	+				+0.4
3,262,849	+				+0.4
3,262,850	-				-0.8
3,262,850	-				-1.4
3,262,852	+				-1.5
3,262,852	+				+0.4
3,262,871	+				-0.6
3,262,871	+				-1.2
3,262,871	+				+0.4
3,262,871	+				+0.4
3,262,871	+				+0.4
3,262,871	+				-0.6
3,262,872	-				-0.6
3,262,872	-				-1.2
3,262,872	-				+0.4
3,262,872	-				-1.8
3,262,872	-				-0.4
3,262,872	-				+0.4
3,262,872	-				+0.4
3,262,873	+				+0.4
3,262,873	+				-0.6
3,262,873	+				-0.6
3,262,873	+				+0.4
3,262,873	+				-0.6
3,262,873	+				-1.8
3,262,874	-				-0.6
3,262,874	-				+0.4
3,262,874	-				-1.2
3,262,874	-				-0.6
3,262,874	-				-0.4
3,262,874	-				+0.4
3,262,874	-				+0.0
3,262,888	+				+0.4
3,262,889	-				-2.7
3,262,891	+				-1.2
3,262,891	+				+0.4
3,262,891	+				-1.2
3,262,891	+				+0.4
3,262,891	+				+0.4
3,262,892	-				+0.4
3,262,892	-				+0.4
3,262,892	-				+0.4
3,262,909	+				+0.4
3,262,910	-				-1.2
3,262,912	+				-0.1
3,262,913	-				-0.6
3,262,969	+				-0.6
3,262,970	-				+0.4
3,262,970	-				+0.4
3,262,970	-				+0.4
3,263,050	-				+0.4
3,263,050	-				+0.4
3,263,094	-				-0.6
3,263,353	-				-0.6