Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2682

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,169,639	+		Pf6N2E2_2680	0.22	+0.3
3,169,640	-		Pf6N2E2_2680	0.22	-0.7
3,169,640	-		Pf6N2E2_2680	0.22	-0.7
3,169,744	+		Pf6N2E2_2680	0.40	-0.7
3,169,745	-		Pf6N2E2_2680	0.40	+0.3
3,169,745	-		Pf6N2E2_2680	0.40	+0.3
3,169,745	-		Pf6N2E2_2680	0.40	-0.7
3,169,790	+		Pf6N2E2_2680	0.47	+0.3
3,169,790	+		Pf6N2E2_2680	0.47	-0.7
3,169,791	-		Pf6N2E2_2680	0.47	-0.1
3,169,791	-		Pf6N2E2_2680	0.47	+0.3
3,169,816	+		Pf6N2E2_2680	0.52	-1.1
3,169,816	+		Pf6N2E2_2680	0.52	-1.2
3,170,031	-		Pf6N2E2_2680	0.88	-0.7
3,170,112	+				+0.3
3,170,112	+				+0.9
3,170,112	+				+0.3
3,170,112	+				-0.7
3,170,112	+				+0.3
3,170,112	+				-1.2
3,170,113	-				-0.4
3,170,396	+		Pf6N2E2_2681	0.44	+0.3
3,170,396	+		Pf6N2E2_2681	0.44	+0.3
3,170,419	+		Pf6N2E2_2681	0.52	-0.7
3,170,461	+		Pf6N2E2_2681	0.65	-1.2
3,170,461	+		Pf6N2E2_2681	0.65	-0.7
3,170,462	-		Pf6N2E2_2681	0.65	-0.7
3,170,601	+				-0.7
3,170,601	+				-0.7
3,170,602	-				-0.7
3,170,602	-				+0.3
3,170,602	-				-0.7
3,170,735	+		Pf6N2E2_2682	0.12	-1.4
3,170,736	-		Pf6N2E2_2682	0.12	+0.3
3,170,736	-		Pf6N2E2_2682	0.12	-1.2
3,170,770	-		Pf6N2E2_2682	0.16	-0.7
3,170,937	-		Pf6N2E2_2682	0.34	-0.7
3,171,565	+				+0.3
3,171,566	-				+0.6
3,171,595	+				+0.3
3,171,596	-				+0.3
3,171,596	-				-0.7
3,172,025	+		Pf6N2E2_2683	0.58	-0.7
3,172,025	+		Pf6N2E2_2683	0.58	-0.7
3,172,026	-		Pf6N2E2_2683	0.58	-1.5
3,172,052	+		Pf6N2E2_2683	0.61	+0.3
3,172,099	+		Pf6N2E2_2683	0.67	+0.1
3,172,099	+		Pf6N2E2_2683	0.67	+0.3
3,172,099	+		Pf6N2E2_2683	0.67	+0.3
3,172,100	-		Pf6N2E2_2683	0.67	-0.7
3,172,100	-		Pf6N2E2_2683	0.67	-0.3
3,172,100	-		Pf6N2E2_2683	0.67	-2.2
3,172,100	-		Pf6N2E2_2683	0.67	-0.8
3,172,100	-		Pf6N2E2_2683	0.67	-0.7
3,172,195	+		Pf6N2E2_2683	0.79	-0.2
3,172,195	+		Pf6N2E2_2683	0.79	-0.7
3,172,195	+		Pf6N2E2_2683	0.79	+0.3
3,172,195	+		Pf6N2E2_2683	0.79	-0.7
3,172,196	-		Pf6N2E2_2683	0.79	-0.7
3,172,196	-		Pf6N2E2_2683	0.79	+0.3
3,172,196	-		Pf6N2E2_2683	0.79	+0.3
3,172,196	-		Pf6N2E2_2683	0.79	+0.3
3,172,196	-		Pf6N2E2_2683	0.79	+0.3
3,172,222	+		Pf6N2E2_2683	0.82	+0.3
3,172,222	+		Pf6N2E2_2683	0.82	+0.3
3,172,222	+		Pf6N2E2_2683	0.82	-1.2
3,172,222	+		Pf6N2E2_2683	0.82	+0.3
3,172,222	+		Pf6N2E2_2683	0.82	-1.2
3,172,223	-		Pf6N2E2_2683	0.83	+0.3
3,172,223	-		Pf6N2E2_2683	0.83	+0.3
3,172,223	-		Pf6N2E2_2683	0.83	-0.7
3,172,233	-		Pf6N2E2_2683	0.84	+0.3
3,172,401	+				+0.3
3,172,401	+				+0.3
3,172,402	-				+0.3
3,172,402	-				+0.3
3,172,452	+		Pf6N2E2_2684	0.15	+0.3
3,172,452	+		Pf6N2E2_2684	0.15	+0.3
3,172,452	+		Pf6N2E2_2684	0.15	-0.7
3,172,452	+		Pf6N2E2_2684	0.15	+0.3
3,172,452	+		Pf6N2E2_2684	0.15	+0.3
3,172,452	+		Pf6N2E2_2684	0.15	+0.3
3,172,452	+		Pf6N2E2_2684	0.15	+0.3
3,172,452	+		Pf6N2E2_2684	0.15	-0.7
3,172,452	+		Pf6N2E2_2684	0.15	+0.3
3,172,452	+		Pf6N2E2_2684	0.15	+0.3
3,172,452	+		Pf6N2E2_2684	0.15	+0.3
3,172,452	+		Pf6N2E2_2684	0.15	-0.6
3,172,452	+		Pf6N2E2_2684	0.15	-0.8
3,172,453	-		Pf6N2E2_2684	0.15	-0.7
3,172,453	-		Pf6N2E2_2684	0.15	+0.3
3,172,453	-		Pf6N2E2_2684	0.15	-0.4
3,172,453	-		Pf6N2E2_2684	0.15	+0.3
3,172,453	-		Pf6N2E2_2684	0.15	+0.3
3,172,453	-		Pf6N2E2_2684	0.15	-0.7
3,172,453	-		Pf6N2E2_2684	0.15	-0.5
3,172,453	-		Pf6N2E2_2684	0.15	-0.7
3,172,453	-		Pf6N2E2_2684	0.15	-0.2
3,172,453	-		Pf6N2E2_2684	0.15	-1.7
3,172,453	-		Pf6N2E2_2684	0.15	-1.2
3,172,453	-		Pf6N2E2_2684	0.15	-0.7
3,172,453	-		Pf6N2E2_2684	0.15	-0.6
3,172,453	-		Pf6N2E2_2684	0.15	-1.2
3,172,453	-		Pf6N2E2_2684	0.15	-0.7
3,172,453	-		Pf6N2E2_2684	0.15	-0.7
3,172,517	-		Pf6N2E2_2684	0.27	-0.4
3,172,517	-		Pf6N2E2_2684	0.27	-0.7
3,172,517	-		Pf6N2E2_2684	0.27	-0.7
3,172,535	+		Pf6N2E2_2684	0.30	+0.3
3,172,535	+		Pf6N2E2_2684	0.30	-0.7
3,172,536	-		Pf6N2E2_2684	0.30	+0.3
3,172,536	-		Pf6N2E2_2684	0.30	-0.7
3,172,536	-		Pf6N2E2_2684	0.30	+0.3
3,172,536	-		Pf6N2E2_2684	0.30	+0.3