Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2636

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,097,894	+		Pf6N2E2_2635	0.37	-0.6
3,097,894	+		Pf6N2E2_2635	0.37	+0.4
3,097,895	-		Pf6N2E2_2635	0.37	-0.6
3,097,990	+		Pf6N2E2_2635	0.46	-0.0
3,097,991	-		Pf6N2E2_2635	0.46	+0.4
3,098,345	+		Pf6N2E2_2635	0.80	-1.2
3,098,345	+		Pf6N2E2_2635	0.80	+0.4
3,098,346	-		Pf6N2E2_2635	0.80	+0.4
3,098,613	+				-1.2
3,098,614	-				+0.4
3,098,630	-				-0.6
3,098,763	+				-0.6
3,098,776	+				+0.4
3,098,776	+				+0.4
3,098,777	-				-0.3
3,098,931	-		Pf6N2E2_2636	0.16	-0.6
3,099,158	+		Pf6N2E2_2636	0.88	-2.0
3,099,158	+		Pf6N2E2_2636	0.88	+0.4
3,099,159	-		Pf6N2E2_2636	0.89	+0.4
3,099,191	+				-1.2
3,099,191	+				-0.6
3,099,192	-				+0.4
3,099,425	+		Pf6N2E2_2637	0.37	-0.6
3,099,425	+		Pf6N2E2_2637	0.37	+0.4
3,099,425	+		Pf6N2E2_2637	0.37	+0.4
3,099,425	+		Pf6N2E2_2637	0.37	+0.4
3,099,426	-		Pf6N2E2_2637	0.37	-1.0
3,099,426	-		Pf6N2E2_2637	0.37	-0.6
3,099,426	-		Pf6N2E2_2637	0.37	+0.4
3,099,473	+		Pf6N2E2_2637	0.45	-0.6
3,099,473	+		Pf6N2E2_2637	0.45	+0.4
3,099,473	+		Pf6N2E2_2637	0.45	+0.4
3,099,473	+		Pf6N2E2_2637	0.45	+0.4
3,099,474	-		Pf6N2E2_2637	0.46	-1.3
3,099,474	-		Pf6N2E2_2637	0.46	+0.4
3,099,474	-		Pf6N2E2_2637	0.46	+0.4
3,099,474	-		Pf6N2E2_2637	0.46	+0.4
3,099,566	+		Pf6N2E2_2637	0.61	+0.4
3,099,566	+		Pf6N2E2_2637	0.61	+0.4
3,099,567	-		Pf6N2E2_2637	0.61	-0.6
3,099,567	-		Pf6N2E2_2637	0.61	-1.2
3,099,567	-		Pf6N2E2_2637	0.61	-0.6
3,099,569	+		Pf6N2E2_2637	0.62	+0.4
3,099,569	+		Pf6N2E2_2637	0.62	-1.5
3,099,569	+		Pf6N2E2_2637	0.62	+0.4
3,099,570	-		Pf6N2E2_2637	0.62	+0.4
3,099,570	-		Pf6N2E2_2637	0.62	-0.6
3,099,570	-		Pf6N2E2_2637	0.62	-0.6
3,099,570	-		Pf6N2E2_2637	0.62	-1.2
3,099,570	-		Pf6N2E2_2637	0.62	-0.6
3,099,570	-		Pf6N2E2_2637	0.62	-1.3
3,099,662	+		Pf6N2E2_2637	0.78	-0.6
3,099,663	-		Pf6N2E2_2637	0.78	+0.4
3,099,663	-		Pf6N2E2_2637	0.78	-0.4
3,099,761	+				+0.4
3,099,761	+				-0.6
3,099,761	+				+0.4
3,099,761	+				+0.4
3,099,762	-				+0.4
3,099,762	-				+0.4
3,099,762	-				-0.8
3,099,762	-				+0.4
3,099,762	-				-0.6
3,099,762	-				+0.8
3,099,762	-				+0.4
3,099,783	+				+0.4
3,099,784	-				-1.6
3,099,798	+				-1.3
3,099,798	+				-1.2
3,099,799	-				-0.6
3,099,799	-				+0.4
3,099,799	-				+1.4
3,099,799	-				-0.6
3,099,799	-				+0.4
3,099,799	-				+0.4
3,099,861	+				+0.4
3,099,878	+				+0.4
3,099,879	-				+0.4
3,099,879	-				+0.4
3,099,879	-				-0.6
3,099,885	+				+0.4
3,099,885	+				-0.6
3,099,921	-				-1.2
3,099,921	-				-0.6
3,099,944	+				-1.1
3,099,944	+				+0.4
3,099,945	-				+0.4
3,099,945	-				-0.6
3,099,945	-				+1.4
3,100,018	-				-1.2
3,100,018	-				-1.2
3,100,090	-		Pf6N2E2_2638	0.17	-1.2
3,100,129	+		Pf6N2E2_2638	0.22	-0.7