Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2607

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,062,785	+		Pf6N2E2_2605	0.64	-0.9
3,062,786	-		Pf6N2E2_2605	0.64	-0.9
3,062,786	-		Pf6N2E2_2605	0.64	-0.8
3,062,795	-		Pf6N2E2_2605	0.65	-0.7
3,062,795	-		Pf6N2E2_2605	0.65	-0.8
3,062,800	+		Pf6N2E2_2605	0.65	-0.9
3,062,801	-		Pf6N2E2_2605	0.66	-0.9
3,062,822	+		Pf6N2E2_2605	0.68	-1.1
3,062,823	-		Pf6N2E2_2605	0.68	-0.9
3,062,823	-		Pf6N2E2_2605	0.68	-0.8
3,062,823	-		Pf6N2E2_2605	0.68	-0.9
3,062,844	-		Pf6N2E2_2605	0.70	-1.0
3,063,094	+				-0.9
3,063,095	-				-0.8
3,063,095	-				-0.6
3,063,095	-				-0.7
3,063,095	-				-0.8
3,063,095	-				-0.7
3,063,122	-		Pf6N2E2_2606	0.14	-1.1
3,063,122	-		Pf6N2E2_2606	0.14	-0.8
3,063,138	+		Pf6N2E2_2606	0.21	-0.9
3,063,139	-		Pf6N2E2_2606	0.21	-0.8
3,063,178	+		Pf6N2E2_2606	0.37	-0.7
3,063,224	+		Pf6N2E2_2606	0.56	-0.7
3,063,224	+		Pf6N2E2_2606	0.56	-1.0
3,063,225	-		Pf6N2E2_2606	0.56	-0.6
3,063,225	-		Pf6N2E2_2606	0.56	-0.6
3,063,233	-		Pf6N2E2_2606	0.59	-2.2
3,063,276	+		Pf6N2E2_2606	0.77	-0.6
3,063,276	+		Pf6N2E2_2606	0.77	-0.9
3,063,276	+		Pf6N2E2_2606	0.77	-1.1
3,063,276	+		Pf6N2E2_2606	0.77	-0.7
3,063,276	+		Pf6N2E2_2606	0.77	-0.9
3,063,277	-		Pf6N2E2_2606	0.77	-0.3
3,063,277	-		Pf6N2E2_2606	0.77	-0.6
3,063,277	-		Pf6N2E2_2606	0.77	-0.6
3,063,277	-		Pf6N2E2_2606	0.77	+0.4
3,063,281	+		Pf6N2E2_2606	0.79	-1.0
3,063,281	+		Pf6N2E2_2606	0.79	-1.0
3,063,281	+		Pf6N2E2_2606	0.79	-0.8
3,063,282	-		Pf6N2E2_2606	0.79	-1.2
3,063,282	-		Pf6N2E2_2606	0.79	-0.2
3,063,282	-				-0.6
3,063,282	-		Pf6N2E2_2606	0.79	-1.2
3,063,299	+		Pf6N2E2_2606	0.86	-1.2
3,063,331	-				-0.6
3,063,331	-				+0.4
3,063,480	+		Pf6N2E2_2607	0.12	-0.7
3,063,515	+		Pf6N2E2_2607	0.16	+0.4
3,063,516	-		Pf6N2E2_2607	0.16	-0.1
3,063,516	-		Pf6N2E2_2607	0.16	-3.0
3,063,531	-		Pf6N2E2_2607	0.17	+0.4
3,063,566	+		Pf6N2E2_2607	0.21	-0.6
3,063,566	+		Pf6N2E2_2607	0.21	-1.2
3,063,567	-		Pf6N2E2_2607	0.21	-2.0
3,063,778	+		Pf6N2E2_2607	0.41	-0.6
3,063,778	+		Pf6N2E2_2607	0.41	-0.6
3,063,778	+		Pf6N2E2_2607	0.41	+0.4
3,063,779	-		Pf6N2E2_2607	0.41	+0.4
3,063,798	+		Pf6N2E2_2607	0.43	-2.0
3,063,798	+		Pf6N2E2_2607	0.43	+0.4
3,063,799	-		Pf6N2E2_2607	0.43	-1.2
3,063,833	+		Pf6N2E2_2607	0.46	-0.6
3,063,834	-		Pf6N2E2_2607	0.46	+0.4
3,063,837	+		Pf6N2E2_2607	0.46	+0.4
3,063,837	+		Pf6N2E2_2607	0.46	-1.6
3,063,837	+		Pf6N2E2_2607	0.46	+0.4
3,063,838	-		Pf6N2E2_2607	0.46	-0.6
3,063,838	-		Pf6N2E2_2607	0.46	-0.2
3,063,838	-		Pf6N2E2_2607	0.46	+0.8
3,063,838	-		Pf6N2E2_2607	0.46	-0.6
3,063,838	-		Pf6N2E2_2607	0.46	-0.8
3,063,838	-		Pf6N2E2_2607	0.46	+0.4
3,063,838	-		Pf6N2E2_2607	0.46	+0.4
3,063,857	-		Pf6N2E2_2607	0.48	-0.9
3,063,937	-		Pf6N2E2_2607	0.56	-0.6
3,063,937	-		Pf6N2E2_2607	0.56	-0.6
3,063,937	-		Pf6N2E2_2607	0.56	-0.6
3,063,979	+		Pf6N2E2_2607	0.60	-0.6
3,063,979	+		Pf6N2E2_2607	0.60	-2.0
3,063,979	+		Pf6N2E2_2607	0.60	-1.1
3,064,010	+		Pf6N2E2_2607	0.63	+0.4
3,064,010	+		Pf6N2E2_2607	0.63	+0.4
3,064,146	-		Pf6N2E2_2607	0.76	-0.6
3,064,146	-		Pf6N2E2_2607	0.76	+0.4
3,064,155	-		Pf6N2E2_2607	0.77	+0.4
3,064,241	+		Pf6N2E2_2607	0.85	-0.6
3,064,241	+		Pf6N2E2_2607	0.85	+0.4
3,064,241	+		Pf6N2E2_2607	0.85	+0.4
3,064,241	+		Pf6N2E2_2607	0.85	+0.4
3,064,242	-		Pf6N2E2_2607	0.85	+0.4
3,064,242	-		Pf6N2E2_2607	0.85	-0.6
3,064,242	-		Pf6N2E2_2607	0.85	-0.7
3,064,395	+				-0.6
3,064,396	-				+0.4
3,064,396	-				-0.6
3,064,447	+				+0.4
3,064,462	+				+0.4
3,064,496	+				+0.4
3,064,497	-				-0.2
3,064,517	+				+0.4
3,064,517	+				-1.5
3,064,517	+				-0.6
3,064,518	-				+0.4
3,064,518	-				-0.6
3,064,518	-				+0.4
3,064,605	+		Pf6N2E2_2608	0.14	-0.6
3,064,605	+		Pf6N2E2_2608	0.14	+0.4
3,064,606	-		Pf6N2E2_2608	0.14	-1.0
3,064,649	+		Pf6N2E2_2608	0.17	-0.2
3,064,756	+		Pf6N2E2_2608	0.24	+0.4
3,064,756	+		Pf6N2E2_2608	0.24	+0.4
3,064,756	+		Pf6N2E2_2608	0.24	+0.4
3,064,756	+		Pf6N2E2_2608	0.24	+0.4
3,064,757	-		Pf6N2E2_2608	0.24	+0.4
3,064,757	-		Pf6N2E2_2608	0.24	+0.4
3,064,757	-		Pf6N2E2_2608	0.24	-1.4
3,064,757	-		Pf6N2E2_2608	0.24	-0.6
3,064,757	-		Pf6N2E2_2608	0.24	-0.6
3,064,757	-		Pf6N2E2_2608	0.24	-0.8
3,064,776	-		Pf6N2E2_2608	0.26	-0.6
3,064,844	+		Pf6N2E2_2608	0.30	+0.4
3,065,000	+		Pf6N2E2_2608	0.40	-0.6
3,065,001	-		Pf6N2E2_2608	0.41	+0.4
3,065,001	-		Pf6N2E2_2608	0.41	-0.6
3,065,001	-		Pf6N2E2_2608	0.41	+0.4
3,065,001	-		Pf6N2E2_2608	0.41	-1.2
3,065,001	-		Pf6N2E2_2608	0.41	-2.8
3,065,001	-		Pf6N2E2_2608	0.41	-0.4
3,065,005	-		Pf6N2E2_2608	0.41	-1.6
3,065,038	+		Pf6N2E2_2608	0.43	-0.6
3,065,039	-		Pf6N2E2_2608	0.43	+0.5
3,065,053	+		Pf6N2E2_2608	0.44	-0.7
3,065,210	+		Pf6N2E2_2608	0.55	+0.4