Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2600

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
3,056,526	+				+1.7
3,056,526	+				+2.4
3,056,526	+				+0.4
3,056,527	-				+0.4
3,056,561	-				+0.4
3,056,573	-				+0.4
3,056,573	-				+0.4
3,056,573	-				+0.4
3,056,573	-				+1.4
3,056,573	-				+0.4
3,056,617	-				-1.2
3,056,625	-				+0.4
3,056,625	-				-0.6
3,056,627	+				+1.1
3,056,627	+				+1.6
3,056,627	+				+0.4
3,056,627	+				+0.4
3,056,628	-				+0.4
3,056,628	-				-0.6
3,056,628	-				+0.4
3,056,631	+				-0.6
3,056,632	-				+1.0
3,056,632	-				+1.8
3,056,632	-				+0.4
3,056,682	-				-0.6
3,056,708	-				-1.2
3,057,001	-				-1.8
3,057,001	-				+0.4
3,057,126	+		Pf6N2E2_2599	0.32	+0.4
3,057,126	+		Pf6N2E2_2599	0.32	+0.4
3,057,126	+		Pf6N2E2_2599	0.32	+0.9
3,057,126	+		Pf6N2E2_2599	0.32	+0.3
3,057,126	+		Pf6N2E2_2599	0.32	+0.4
3,057,126	+		Pf6N2E2_2599	0.32	-0.6
3,057,127	-		Pf6N2E2_2599	0.32	+0.4
3,057,127	-		Pf6N2E2_2599	0.32	-0.6
3,057,127	-		Pf6N2E2_2599	0.32	-0.2
3,057,127	-		Pf6N2E2_2599	0.32	+0.4
3,057,127	-		Pf6N2E2_2599	0.32	-0.2
3,057,133	-		Pf6N2E2_2599	0.34	-0.5
3,057,133	-		Pf6N2E2_2599	0.34	-0.3
3,057,133	-		Pf6N2E2_2599	0.34	-0.6
3,057,133	-		Pf6N2E2_2599	0.34	-1.6
3,057,227	+		Pf6N2E2_2599	0.58	-0.6
3,057,244	+		Pf6N2E2_2599	0.62	+0.5
3,057,247	-		Pf6N2E2_2599	0.63	+0.9
3,057,381	-				+1.0
3,057,399	+				-0.6
3,057,399	+				+0.4
3,057,399	+				+0.1
3,057,399	+				+0.2
3,057,399	+				-0.6
3,057,400	-				+0.1
3,057,400	-				-0.2
3,057,424	+				+0.7
3,057,424	+				-0.3
3,057,424	+				+0.3
3,057,424	+				+0.4
3,057,425	-				+0.4
3,057,427	-				-1.2
3,057,435	+				+0.0
3,057,459	+				-0.6
3,057,460	-				-1.2
3,058,111	-		Pf6N2E2_2600	0.41	-1.4
3,058,111	-		Pf6N2E2_2600	0.41	+0.4
3,058,111	-		Pf6N2E2_2600	0.41	+0.4
3,058,111	-		Pf6N2E2_2600	0.41	-0.1
3,058,111	-		Pf6N2E2_2600	0.41	+0.4
3,058,111	-		Pf6N2E2_2600	0.41	+0.1
3,058,111	-		Pf6N2E2_2600	0.41	+0.4
3,058,111	-		Pf6N2E2_2600	0.41	-0.6
3,058,111	-		Pf6N2E2_2600	0.41	-0.6
3,058,111	-		Pf6N2E2_2600	0.41	+0.4
3,058,112	+		Pf6N2E2_2600	0.41	+0.4
3,058,112	+		Pf6N2E2_2600	0.41	+0.3
3,058,112	+		Pf6N2E2_2600	0.41	+0.4
3,058,112	+		Pf6N2E2_2600	0.41	+0.0
3,058,112	+		Pf6N2E2_2600	0.41	-0.2
3,058,112	+		Pf6N2E2_2600	0.41	+0.4
3,058,113	-		Pf6N2E2_2600	0.41	+0.4
3,058,113	-		Pf6N2E2_2600	0.41	+0.4
3,058,113	-		Pf6N2E2_2600	0.41	+0.4
3,058,113	-		Pf6N2E2_2600	0.41	+0.4
3,058,113	-		Pf6N2E2_2600	0.41	+0.4
3,058,113	-		Pf6N2E2_2600	0.41	+0.4
3,058,224	+		Pf6N2E2_2600	0.49	+0.4
3,058,224	+		Pf6N2E2_2600	0.49	+0.4
3,058,224	+		Pf6N2E2_2600	0.49	+0.4
3,058,225	-		Pf6N2E2_2600	0.49	+0.4
3,058,225	-		Pf6N2E2_2600	0.49	-0.1
3,058,225	-		Pf6N2E2_2600	0.49	+0.4
3,058,225	-		Pf6N2E2_2600	0.49	+0.4
3,058,225	-		Pf6N2E2_2600	0.49	-0.6
3,058,225	-		Pf6N2E2_2600	0.49	+0.4
3,058,225	-		Pf6N2E2_2600	0.49	-0.2
3,058,225	-		Pf6N2E2_2600	0.49	+0.2
3,058,323	+		Pf6N2E2_2600	0.56	-4.3
3,058,324	-		Pf6N2E2_2600	0.56	+0.4
3,058,383	+		Pf6N2E2_2600	0.60	+0.4
3,058,384	-		Pf6N2E2_2600	0.60	-0.6
3,058,384	-		Pf6N2E2_2600	0.60	+0.4
3,058,384	-		Pf6N2E2_2600	0.60	+0.6
3,058,475	+		Pf6N2E2_2600	0.66	+1.4
3,058,475	+		Pf6N2E2_2600	0.66	-0.6
3,058,475	+		Pf6N2E2_2600	0.66	+0.4
3,058,475	+		Pf6N2E2_2600	0.66	+0.4
3,058,475	+		Pf6N2E2_2600	0.66	+0.6
3,058,476	-		Pf6N2E2_2600	0.66	+0.4
3,058,476	-		Pf6N2E2_2600	0.66	-0.6
3,058,476	-		Pf6N2E2_2600	0.66	+2.2
3,058,476	-		Pf6N2E2_2600	0.66	+0.4
3,058,476	-		Pf6N2E2_2600	0.66	+0.4
3,058,476	-		Pf6N2E2_2600	0.66	+0.4
3,058,476	-		Pf6N2E2_2600	0.66	+0.4
3,058,476	-		Pf6N2E2_2600	0.66	-0.4
3,058,482	+		Pf6N2E2_2600	0.67	+0.4
3,058,482	+		Pf6N2E2_2600	0.67	+0.4
3,058,483	-		Pf6N2E2_2600	0.67	-0.3
3,058,508	-		Pf6N2E2_2600	0.68	+0.4
3,058,508	-		Pf6N2E2_2600	0.68	+0.4
3,058,528	-		Pf6N2E2_2600	0.70	+0.4
3,058,539	-		Pf6N2E2_2600	0.71	+0.6
3,058,545	+		Pf6N2E2_2600	0.71	+0.0
3,058,545	+		Pf6N2E2_2600	0.71	+0.3
3,058,580	-		Pf6N2E2_2600	0.74	+0.4
3,058,658	+		Pf6N2E2_2600	0.79	+0.4
3,058,658	+		Pf6N2E2_2600	0.79	+0.6
3,058,658	+		Pf6N2E2_2600	0.79	-0.6
3,058,658	+		Pf6N2E2_2600	0.79	-1.2
3,058,659	-		Pf6N2E2_2600	0.79	+0.0
3,058,734	+		Pf6N2E2_2600	0.84	-0.3
3,058,821	+				-0.6
3,058,822	-				-1.2
3,058,903	-				+0.4
3,058,928	-				-1.2
3,058,942	+				-0.6
3,059,000	-				+0.4
3,059,000	-				+0.9
3,059,000	-				+0.4
3,059,019	-				+0.4
3,059,019	-				-0.1
3,059,019	-				-1.2
3,059,087	-		Pf6N2E2_2601	0.12	-0.6
3,059,159	-		Pf6N2E2_2601	0.31	+0.4
3,059,165	+		Pf6N2E2_2601	0.33	-0.6
3,059,165	+				+0.4
3,059,166	-		Pf6N2E2_2601	0.33	+0.4
3,059,166	-		Pf6N2E2_2601	0.33	-0.6
3,059,166	-		Pf6N2E2_2601	0.33	+0.4
3,059,188	+		Pf6N2E2_2601	0.39	-0.3
3,059,188	+		Pf6N2E2_2601	0.39	-0.6
3,059,189	-		Pf6N2E2_2601	0.40	-0.6
3,059,189	-		Pf6N2E2_2601	0.40	-0.5
3,059,189	-		Pf6N2E2_2601	0.40	+0.4
3,059,304	-		Pf6N2E2_2601	0.70	+0.4
3,059,304	-		Pf6N2E2_2601	0.70	+0.4
3,059,304	-		Pf6N2E2_2601	0.70	-0.6
3,059,402	-				-0.5
3,059,443	-				-0.6
3,059,478	+				+0.4
3,059,478	+				-0.6
3,059,479	-				+0.4
3,059,479	-				+0.4
3,059,479	-				+0.4
3,059,479	-				-0.6
3,059,479	-				-0.2
3,059,479	-				+0.4
3,059,481	+				+0.1
3,059,481	+				-0.8
3,059,482	-				-0.0
3,059,482	-				+2.7
3,059,482	-				+0.4
3,059,498	+				-0.6
3,059,498	+				-1.6
3,059,499	-				+0.1
3,059,606	+		Pf6N2E2_2602	0.15	+0.4
3,059,607	-		Pf6N2E2_2602	0.15	+0.1
3,059,607	-		Pf6N2E2_2602	0.15	-1.2
3,059,607	-		Pf6N2E2_2602	0.15	+0.1
3,059,666	-		Pf6N2E2_2602	0.22	+0.4
3,059,666	-		Pf6N2E2_2602	0.22	-0.6
3,059,899	+		Pf6N2E2_2602	0.49	+1.1
3,059,900	-		Pf6N2E2_2602	0.49	-0.6
3,059,900	-		Pf6N2E2_2602	0.49	-0.7
3,059,900	-		Pf6N2E2_2602	0.49	+0.4
3,059,900	-		Pf6N2E2_2602	0.49	-0.6
3,059,900	-		Pf6N2E2_2602	0.49	+0.2
3,059,900	-		Pf6N2E2_2602	0.49	-1.6