Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2357

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,789,486	+		Pf6N2E2_2355	0.79	+0.4
2,789,712	-				+0.4
2,789,732	+				-1.2
2,789,733	-				-0.6
2,789,764	+				-0.6
2,789,796	+				-0.8
2,789,797	-				+0.4
2,789,797	-				-0.3
2,789,939	+		Pf6N2E2_2356	0.14	-0.6
2,789,984	+		Pf6N2E2_2356	0.24	+0.4
2,790,483	+		Pf6N2E2_2357	0.13	+0.4
2,790,508	+		Pf6N2E2_2357	0.15	+0.4
2,790,509	-		Pf6N2E2_2357	0.15	-0.6
2,790,848	-		Pf6N2E2_2357	0.47	+0.2
2,791,064	-		Pf6N2E2_2357	0.67	+0.4
2,791,114	+		Pf6N2E2_2357	0.72	-0.6
2,791,115	-		Pf6N2E2_2357	0.72	-0.6
2,791,322	-				-0.6
2,791,337	-				+0.4
2,791,337	-				-1.6
2,791,377	-				-2.4
2,791,377	-				-0.2
2,791,419	+				-0.8
2,791,420	-				-0.6
2,791,420	-				-0.1
2,791,420	-				+0.4
2,791,420	-				-0.8
2,791,420	-				+1.6
2,791,420	-				-0.6
2,791,420	-				+0.4
2,791,420	-				-0.2
2,791,420	-				-0.5
2,791,420	-				+1.4
2,791,482	+				+0.4
2,791,482	+				-1.2
2,791,608	-				-1.9
2,791,625	+				+0.4
2,791,686	+				+0.4
2,791,728	+				+0.4
2,791,728	+				+0.4
2,791,729	-				-1.6
2,791,736	+				+0.4
2,791,751	+				-1.7
2,791,752	-				-0.9
2,791,752	-				+0.4
2,791,930	-				-1.1
2,791,930	-				+0.4
2,792,014	+				-0.6
2,792,015	-				-0.6
2,792,015	-				-0.6
2,792,015	-				-0.1
2,792,015	-				-0.6
2,792,015	-				-0.6
2,792,056	+				+0.4
2,792,077	+				+0.4
2,792,077	+				+0.4
2,792,077	+				-0.6
2,792,078	-				+0.4
2,792,078	-				-0.2
2,792,078	-				-0.6
2,792,220	+				-0.6
2,792,221	-				-0.6
2,792,296	-		Pf6N2E2_2358	0.16	+0.4
2,792,345	+		Pf6N2E2_2358	0.20	+0.4
2,792,345	+		Pf6N2E2_2358	0.20	+0.4