Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2301

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,723,794	+		Pf6N2E2_2300	0.87	-0.6
2,723,794	+		Pf6N2E2_2300	0.87	-0.6
2,723,795	-		Pf6N2E2_2300	0.87	-1.0
2,724,005	+				+0.4
2,724,025	+				+0.4
2,724,025	+				+0.4
2,724,025	+				-2.2
2,724,025	+				+0.4
2,724,026	-				+0.4
2,724,026	-				-0.1
2,724,042	+				-0.6
2,724,042	+				+0.4
2,724,043	-				-0.6
2,724,089	+				+0.4
2,724,089	+				+0.4
2,724,089	+				+0.4
2,724,089	+				-0.8
2,724,090	-				-0.6
2,724,090	-				-0.6
2,724,162	+				+0.4
2,724,162	+				-0.6
2,724,162	+				-1.2
2,724,163	-				+0.4
2,724,163	-				+0.4
2,724,163	-				-1.2
2,724,168	+				-0.5
2,724,168	+				+0.4
2,724,168	+				-1.0
2,724,168	+				+0.4
2,724,168	+				+0.4
2,724,169	-				+0.4
2,724,169	-				-0.6
2,724,345	+				-0.7
2,724,574	-		Pf6N2E2_2301	0.17	-1.6
2,724,663	+		Pf6N2E2_2301	0.20	-0.4
2,724,877	+		Pf6N2E2_2301	0.28	+0.4
2,724,966	+		Pf6N2E2_2301	0.31	-2.3
2,724,966	+		Pf6N2E2_2301	0.31	+0.4
2,724,966	+		Pf6N2E2_2301	0.31	-1.1
2,724,967	-		Pf6N2E2_2301	0.31	-0.6
2,724,967	-		Pf6N2E2_2301	0.31	-2.0
2,724,967	-		Pf6N2E2_2301	0.31	-0.3
2,725,033	-		Pf6N2E2_2301	0.34	-0.6
2,725,080	+		Pf6N2E2_2301	0.36	-1.5
2,725,080	+		Pf6N2E2_2301	0.36	-1.6
2,725,080	+		Pf6N2E2_2301	0.36	-0.6
2,725,080	+		Pf6N2E2_2301	0.36	-0.4
2,725,081	-		Pf6N2E2_2301	0.36	-1.6
2,725,081	-		Pf6N2E2_2301	0.36	-0.7
2,725,131	+		Pf6N2E2_2301	0.37	-1.0
2,725,399	-		Pf6N2E2_2301	0.47	+0.4
2,725,457	+		Pf6N2E2_2301	0.49	-0.7
2,725,458	-		Pf6N2E2_2301	0.49	+0.4
2,725,599	+		Pf6N2E2_2301	0.54	+0.4
2,725,599	+		Pf6N2E2_2301	0.54	-1.2
2,725,599	+		Pf6N2E2_2301	0.54	-1.6
2,725,599	+		Pf6N2E2_2301	0.54	+0.4
2,725,599	+		Pf6N2E2_2301	0.54	-0.5
2,725,600	-		Pf6N2E2_2301	0.55	+0.4
2,725,600	-		Pf6N2E2_2301	0.55	-0.6
2,725,600	-		Pf6N2E2_2301	0.55	-0.6
2,725,600	-		Pf6N2E2_2301	0.55	+0.6
2,725,600	-		Pf6N2E2_2301	0.55	+0.4
2,725,600	-		Pf6N2E2_2301	0.55	+0.8
2,725,623	+		Pf6N2E2_2301	0.55	-1.2
2,725,631	+		Pf6N2E2_2301	0.56	-1.1
2,725,656	+		Pf6N2E2_2301	0.57	+1.4
2,725,908	+		Pf6N2E2_2301	0.66	-1.2
2,725,909	-		Pf6N2E2_2301	0.66	-0.6
2,725,989	+		Pf6N2E2_2301	0.69	+0.4
2,725,999	+		Pf6N2E2_2301	0.69	-0.6
2,725,999	+		Pf6N2E2_2301	0.69	-1.2
2,726,052	+		Pf6N2E2_2301	0.71	+0.4
2,726,052	+		Pf6N2E2_2301	0.71	-0.5
2,726,052	+		Pf6N2E2_2301	0.71	-1.2
2,726,052	+		Pf6N2E2_2301	0.71	+0.4
2,726,052	+		Pf6N2E2_2301	0.71	-0.6
2,726,053	-		Pf6N2E2_2301	0.71	+0.4
2,726,053	-		Pf6N2E2_2301	0.71	-0.9
2,726,053	-		Pf6N2E2_2301	0.71	-0.8
2,726,076	+		Pf6N2E2_2301	0.72	-0.6
2,726,077	-		Pf6N2E2_2301	0.72	-0.1
2,726,077	-		Pf6N2E2_2301	0.72	+0.4
2,726,077	-		Pf6N2E2_2301	0.72	+0.4
2,726,077	-		Pf6N2E2_2301	0.72	-0.5
2,726,077	-		Pf6N2E2_2301	0.72	-1.2
2,726,277	+		Pf6N2E2_2301	0.79	+0.4
2,726,382	+		Pf6N2E2_2301	0.83	+0.4
2,726,382	+		Pf6N2E2_2301	0.83	-1.6
2,726,382	+		Pf6N2E2_2301	0.83	+0.9
2,726,382	+		Pf6N2E2_2301	0.83	+0.4
2,726,382	+		Pf6N2E2_2301	0.83	+0.4
2,726,382	+		Pf6N2E2_2301	0.83	-1.2
2,726,382	+		Pf6N2E2_2301	0.83	-0.6
2,726,383	-		Pf6N2E2_2301	0.83	-0.6
2,726,383	-		Pf6N2E2_2301	0.83	-1.2
2,726,383	-		Pf6N2E2_2301	0.83	-0.1
2,726,383	-		Pf6N2E2_2301	0.83	-0.4
2,726,383	-		Pf6N2E2_2301	0.83	+0.4
2,726,383	-		Pf6N2E2_2301	0.83	+0.4
2,726,383	-		Pf6N2E2_2301	0.83	+0.0
2,726,383	-		Pf6N2E2_2301	0.83	-1.1
2,726,412	+		Pf6N2E2_2301	0.84	+0.4
2,726,412	+		Pf6N2E2_2301	0.84	+0.4
2,726,412	+		Pf6N2E2_2301	0.84	-1.2
2,726,430	+		Pf6N2E2_2301	0.85	-0.2
2,726,430	+		Pf6N2E2_2301	0.85	-0.6
2,726,430	+		Pf6N2E2_2301	0.85	-1.2
2,726,430	+		Pf6N2E2_2301	0.85	-0.2
2,726,430	+		Pf6N2E2_2301	0.85	-1.0
2,726,431	-		Pf6N2E2_2301	0.85	-2.0
2,726,476	-		Pf6N2E2_2301	0.86	-0.6
2,726,562	-		Pf6N2E2_2301	0.90	+0.4
2,726,771	+				+0.4
2,726,790	+				+0.4
2,726,791	-				-1.2
2,726,791	-				+0.4
2,726,791	-				-0.9
2,726,791	-				-1.2
2,726,817	+				+0.4
2,726,817	+				+0.4
2,726,817	+				-1.2
2,726,817	+				+0.0
2,726,817	+				-0.6
2,726,817	+				-1.2
2,726,817	+				-1.1
2,726,818	-				-1.0
2,726,818	-				+0.4
2,726,818	-				-0.5
2,726,818	-				+0.4
2,726,818	-				+0.4
2,726,818	-				-0.6
2,726,818	-				-0.6
2,726,818	-				+0.4
2,726,818	-				-0.6
2,726,844	+				-1.1
2,726,844	+				-0.6
2,726,844	+				+0.4
2,726,861	+				-1.2
2,726,861	+				+0.4
2,726,925	-				+0.4
2,726,925	-				-0.4
2,726,997	-				+0.4
2,726,997	-				+0.4
2,726,997	-				-0.6
2,727,009	+				+0.4
2,727,018	-				+0.4
2,727,047	+				+0.4
2,727,047	+				+0.4
2,727,047	+				+0.4
2,727,048	-				-1.7
2,727,048	-				-0.6
2,727,048	-				-0.3
2,727,050	-				+0.4
2,727,100	+				-1.0
2,727,101	-				+0.1
2,727,101	-				-0.6
2,727,101	-				-0.6
2,727,101	-				-0.6
2,727,120	+				-0.6
2,727,121	-				-0.6
2,727,121	-				-1.2
2,727,157	-				+0.4
2,727,187	+				-0.6
2,727,188	-				-0.3
2,727,188	-				+0.4
2,727,207	+				+0.4
2,727,207	+				-0.8
2,727,207	+				+0.4
2,727,207	+				-0.3
2,727,207	+				+0.4
2,727,207	+				-0.2
2,727,208	-				+0.4
2,727,208	-				+0.4
2,727,208	-				+0.4
2,727,208	-				+0.4
2,727,208	-				+0.4
2,727,208	-				-0.6
2,727,208	-				+0.4
2,727,208	-				+0.4
2,727,208	-				+0.4
2,727,208	-				+0.4
2,727,219	-				-1.2
2,727,230	-				-2.6
2,727,380	+		Pf6N2E2_2302	0.22	+0.4
2,727,380	+		Pf6N2E2_2302	0.22	-0.6
2,727,380	+		Pf6N2E2_2302	0.22	-1.2
2,727,380	+		Pf6N2E2_2302	0.22	+0.4
2,727,380	+		Pf6N2E2_2302	0.22	-1.2
2,727,380	+		Pf6N2E2_2302	0.22	-0.6
2,727,381	-		Pf6N2E2_2302	0.22	+0.4
2,727,381	-		Pf6N2E2_2302	0.22	-0.6
2,727,381	-		Pf6N2E2_2302	0.22	+0.4
2,727,389	+		Pf6N2E2_2302	0.23	+0.4
2,727,490	+		Pf6N2E2_2302	0.36	+0.4
2,727,490	+		Pf6N2E2_2302	0.36	-0.6
2,727,490	+		Pf6N2E2_2302	0.36	+0.5
2,727,491	-		Pf6N2E2_2302	0.36	+0.4
2,727,491	-		Pf6N2E2_2302	0.36	+0.4
2,727,580	+		Pf6N2E2_2302	0.47	-1.5
2,727,708	-		Pf6N2E2_2302	0.63	+0.4
2,727,745	+		Pf6N2E2_2302	0.68	+0.4
2,727,745	+		Pf6N2E2_2302	0.68	+0.4
2,727,746	-		Pf6N2E2_2302	0.68	-0.6
2,727,836	+		Pf6N2E2_2302	0.80	+0.4