Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2290

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,708,362	-		Pf6N2E2_2289	0.28	+1.1
2,708,791	-		Pf6N2E2_2289	0.65	+0.3
2,709,203	-				-0.7
2,709,217	+				+0.3
2,709,218	-				+0.3
2,709,218	-				+0.3
2,709,218	-				+0.3
2,709,218	-				-0.7
2,709,218	-				+0.3
2,709,218	-				+0.8
2,709,376	-				-0.7
2,711,429	-				+0.3
2,711,429	-				+0.3
2,711,429	-				+0.3
2,711,480	-				-0.7
2,711,527	-				+0.3
2,711,664	-				+0.3
2,711,664	-				-1.2
2,711,692	+				+0.5
2,711,692	+				-0.5
2,711,692	+				-0.3
2,711,692	+				-1.8
2,711,692	+				+0.3
2,711,692	+				+0.3
2,711,692	+				-0.5
2,711,692	+				+0.3
2,711,693	-				-0.7
2,711,693	-				-0.7
2,711,693	-				+0.3
2,711,693	-				-0.8
2,711,693	-				-0.7
2,711,693	-				-1.9
2,711,696	+				+0.3
2,711,696	+				-0.6
2,711,696	+				+0.3
2,711,696	+				-0.8
2,711,696	+				-0.4
2,711,696	+				-2.2
2,711,696	+				-0.3
2,711,697	-				-0.7
2,711,697	-				-0.7
2,711,697	-				-0.7
2,711,697	-				-0.7
2,711,697	-				+0.3
2,711,697	-				+0.3
2,711,697	-				+0.3
2,711,697	-				+0.2
2,711,702	+				+0.3
2,711,703	-				-0.7
2,711,703	-				+0.3
2,711,711	+				+0.9
2,711,711	+				+0.3
2,711,711	+				+0.3
2,711,711	+				+0.3
2,711,711	+				-0.7
2,711,716	-				+0.3
2,711,758	+				+0.3
2,711,800	+				+0.3
2,711,877	+				+0.3
2,711,877	+				+0.3
2,711,878	-				-0.7
2,711,986	+		Pf6N2E2_2291	0.29	-0.7
2,712,086	-		Pf6N2E2_2291	0.58	+0.3
2,712,279	+				-0.9
2,712,280	-				-0.7
2,712,321	-				-0.7
2,712,326	+				+0.3
2,712,388	+				+0.3
2,712,388	+				+0.1
2,712,388	+				+0.3
2,712,388	+				-2.7
2,712,388	+				-1.2
2,712,388	+				+0.3
2,712,388	+				+0.3
2,712,388	+				+0.3
2,712,388	+				+0.3
2,712,388	+				-1.0
2,712,389	-				+0.3
2,712,389	-				+0.3
2,712,389	-				-0.7
2,712,389	-				-1.0
2,712,389	-				+0.3
2,712,389	-				-0.7
2,712,389	-				-0.7
2,712,392	+				+0.3
2,712,393	-				+0.3