Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2177

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,580,660	+		Pf6N2E2_2175	0.75	+0.3
2,580,867	+				-2.0
2,580,867	+				+0.3
2,581,008	-		Pf6N2E2_2176	0.21	-0.1
2,581,277	+		Pf6N2E2_2176	0.63	+0.3
2,581,412	+		Pf6N2E2_2176	0.84	-0.7
2,581,413	-		Pf6N2E2_2176	0.84	+0.3
2,581,457	+				+0.3
2,581,633	+				-0.7
2,581,633	+				-0.1
2,581,634	-				-0.2
2,581,634	-				+0.1
2,581,634	-				-0.2
2,581,721	-		Pf6N2E2_2177	0.15	-0.5
2,581,807	-		Pf6N2E2_2177	0.22	-0.4
2,582,092	+		Pf6N2E2_2177	0.43	-2.2
2,582,151	-		Pf6N2E2_2177	0.47	+0.3
2,582,353	+		Pf6N2E2_2177	0.62	+0.3
2,582,398	+		Pf6N2E2_2177	0.65	-1.2
2,582,434	+		Pf6N2E2_2177	0.68	-1.2
2,582,434	+		Pf6N2E2_2177	0.68	+0.3
2,582,434	+		Pf6N2E2_2177	0.68	-0.4
2,582,435	-		Pf6N2E2_2177	0.68	-1.5
2,582,435	-		Pf6N2E2_2177	0.68	+0.3
2,582,435	-		Pf6N2E2_2177	0.68	+0.3
2,582,435	-		Pf6N2E2_2177	0.68	-1.7
2,582,782	+				-2.2
2,582,782	+				+0.3
2,582,782	+				+0.9
2,582,783	-				-0.7
2,582,851	+				+0.3
2,582,851	+				-0.6
2,582,851	+				-0.7
2,582,863	+				+0.3
2,582,863	+				+0.3
2,582,863	+				-1.7
2,582,863	+				+0.3
2,582,864	-				-0.1
2,582,888	+				+0.3
2,582,888	+				-0.8
2,582,889	-				+0.3
2,582,889	-				-0.2
2,583,101	+		Pf6N2E2_2178	0.33	-0.7
2,583,101	+		Pf6N2E2_2178	0.33	-1.7
2,583,151	+		Pf6N2E2_2178	0.40	-0.7
2,583,151	+		Pf6N2E2_2178	0.40	-0.7
2,583,173	+		Pf6N2E2_2178	0.43	-0.5
2,583,173	+		Pf6N2E2_2178	0.43	+0.3
2,583,173	+		Pf6N2E2_2178	0.43	-0.7
2,583,173	+		Pf6N2E2_2178	0.43	-1.2
2,583,174	-		Pf6N2E2_2178	0.43	+0.3
2,583,338	+		Pf6N2E2_2178	0.65	+0.3
2,583,338	+		Pf6N2E2_2178	0.65	+0.3
2,583,338	+		Pf6N2E2_2178	0.65	-0.7
2,583,338	+		Pf6N2E2_2178	0.65	+0.3
2,583,392	+		Pf6N2E2_2178	0.72	+0.3
2,583,392	+		Pf6N2E2_2178	0.72	+0.3
2,583,455	+		Pf6N2E2_2178	0.80	+0.3
2,583,455	+		Pf6N2E2_2178	0.80	-1.2
2,583,584	+				+0.3
2,583,585	-				+1.9
2,583,602	+				+0.3
2,583,602	+				-0.7
2,583,602	+				-0.7
2,583,748	+				+0.3
2,583,748	+				-0.2
2,583,749	-				-0.7
2,583,792	+				+0.3
2,583,798	+				+0.3
2,583,838	-		Pf6N2E2_2179	0.12	+0.3
2,583,838	-		Pf6N2E2_2179	0.12	+0.3
2,583,838	-		Pf6N2E2_2179	0.12	+0.3
2,583,838	-		Pf6N2E2_2179	0.12	-2.2