Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2155

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,559,399	+		Pf6N2E2_2154	0.30	-1.7
2,559,399	+		Pf6N2E2_2154	0.30	+0.1
2,559,400	-		Pf6N2E2_2154	0.30	+0.3
2,559,400	-		Pf6N2E2_2154	0.30	-1.3
2,559,400	-		Pf6N2E2_2154	0.30	+0.3
2,559,471	+		Pf6N2E2_2154	0.37	-0.7
2,559,471	+		Pf6N2E2_2154	0.37	-0.6
2,559,472	-		Pf6N2E2_2154	0.37	+0.3
2,559,588	+		Pf6N2E2_2154	0.49	-0.6
2,559,588	+		Pf6N2E2_2154	0.49	-0.9
2,559,588	+				+0.3
2,559,588	+		Pf6N2E2_2154	0.49	+0.3
2,559,589	-		Pf6N2E2_2154	0.49	+0.3
2,559,589	-		Pf6N2E2_2154	0.49	+0.3
2,559,589	-		Pf6N2E2_2154	0.49	-0.7
2,559,655	+		Pf6N2E2_2154	0.55	-0.7
2,559,656	-		Pf6N2E2_2154	0.55	+0.3
2,559,656	-		Pf6N2E2_2154	0.55	-0.7
2,559,705	+		Pf6N2E2_2154	0.60	-1.3
2,559,705	+		Pf6N2E2_2154	0.60	-1.1
2,559,838	-		Pf6N2E2_2154	0.73	+0.3
2,559,838	-		Pf6N2E2_2154	0.73	+0.9
2,559,838	-		Pf6N2E2_2154	0.73	-0.2
2,559,870	+		Pf6N2E2_2154	0.76	-0.7
2,559,870	+		Pf6N2E2_2154	0.76	-0.7
2,559,871	-		Pf6N2E2_2154	0.76	-1.0
2,559,996	+		Pf6N2E2_2154	0.88	-0.7
2,560,269	+				+0.3
2,560,277	-				+0.3
2,560,395	+		Pf6N2E2_2155	0.15	-2.1
2,560,396	-		Pf6N2E2_2155	0.15	-0.4
2,560,396	-		Pf6N2E2_2155	0.15	-0.7
2,560,446	+		Pf6N2E2_2155	0.33	+0.3
2,560,586	+		Pf6N2E2_2155	0.82	-1.9
2,560,586	+		Pf6N2E2_2155	0.82	+0.3
2,560,587	-		Pf6N2E2_2155	0.82	-2.3
2,560,678	+				-0.7
2,560,678	+				+0.3
2,560,678	+				-0.3
2,560,678	+				+0.3
2,560,679	-				-0.3
2,560,679	-				+0.3
2,560,679	-				+0.3
2,560,682	+				+0.3
2,560,682	+				+0.3
2,560,682	+				+0.3
2,560,682	+				-2.0
2,560,682	+				+0.3
2,560,682	+				-0.7
2,560,682	+				+0.3
2,560,682	+				+0.3
2,560,682	+				+0.3
2,560,683	-				+0.3
2,560,683	-				-0.7
2,560,683	-				+0.9
2,560,683	-				-0.7
2,560,683	-				+0.3
2,560,683	-				-0.3
2,560,683	-				+0.3
2,560,683	-				-0.7
2,560,694	+				+0.3
2,560,694	+				-0.7
2,560,694	+				-2.5
2,560,694	+				+0.3
2,561,154	-		Pf6N2E2_2156	0.68	-0.5
2,561,159	-		Pf6N2E2_2156	0.69	+0.3
2,561,331	+				+1.1
2,561,362	-				-1.7
2,561,381	-				-1.3
2,561,424	+				+0.3