Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2080

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,473,091	+		Pf6N2E2_2079	0.17	-0.3
2,473,381	+		Pf6N2E2_2079	0.50	+0.3
2,473,381	+		Pf6N2E2_2079	0.50	+0.3
2,473,382	-		Pf6N2E2_2079	0.50	-0.7
2,473,382	-				+0.3
2,473,382	-		Pf6N2E2_2079	0.50	+0.3
2,473,412	+		Pf6N2E2_2079	0.54	+0.3
2,473,413	-		Pf6N2E2_2079	0.54	+0.3
2,473,413	-		Pf6N2E2_2079	0.54	+0.3
2,473,413	-		Pf6N2E2_2079	0.54	+0.3
2,473,471	+		Pf6N2E2_2079	0.61	-0.3
2,473,472	-		Pf6N2E2_2079	0.61	-0.3
2,473,472	-		Pf6N2E2_2079	0.61	-0.7
2,473,477	+		Pf6N2E2_2079	0.61	+0.8
2,473,477	+		Pf6N2E2_2079	0.61	-0.7
2,473,478	-		Pf6N2E2_2079	0.62	-0.7
2,473,478	-		Pf6N2E2_2079	0.62	-0.7
2,473,478	-		Pf6N2E2_2079	0.62	+0.3
2,473,579	+		Pf6N2E2_2079	0.73	+0.3
2,473,579	+		Pf6N2E2_2079	0.73	+0.3
2,473,579	+		Pf6N2E2_2079	0.73	+0.3
2,473,579	+		Pf6N2E2_2079	0.73	-0.3
2,473,579	+		Pf6N2E2_2079	0.73	+0.3
2,473,580	-		Pf6N2E2_2079	0.73	-0.7
2,473,580	-		Pf6N2E2_2079	0.73	-0.5
2,473,580	-		Pf6N2E2_2079	0.73	+0.3
2,473,580	-		Pf6N2E2_2079	0.73	-1.3
2,473,607	-		Pf6N2E2_2079	0.77	+0.3
2,473,633	+		Pf6N2E2_2079	0.80	-0.7
2,473,633	+		Pf6N2E2_2079	0.80	+0.3
2,473,633	+		Pf6N2E2_2079	0.80	-0.7
2,473,634	-		Pf6N2E2_2079	0.80	+0.3
2,473,693	+		Pf6N2E2_2079	0.86	-0.7
2,473,693	+		Pf6N2E2_2079	0.86	-1.3
2,473,810	+				+0.3
2,473,810	+				+0.3
2,473,833	+				-0.6
2,473,834	-				+0.3
2,473,943	+				+0.0
2,473,943	+				-1.3
2,473,943	+				+0.9
2,473,943	+				-1.0
2,473,943	+				+0.3
2,474,126	-		Pf6N2E2_2080	0.56	-1.7
2,474,267	-				+0.3
2,474,267	-				+0.3
2,474,267	-				+0.3
2,474,267	-				-0.7
2,474,267	-				-1.3
2,474,349	-				+0.3
2,474,441	+				+0.3
2,474,441	+				+0.3
2,474,441	+				+0.3
2,474,441	+				-0.7
2,474,441	+				+0.3
2,474,441	+				-0.7
2,474,441	+				+0.3
2,474,441	+				+0.3
2,474,442	-				+0.3
2,474,442	-				-0.7
2,474,442	-				-0.7
2,474,442	-				-1.9
2,474,442	-				-0.7
2,474,442	-				+0.9
2,474,442	-				+0.3
2,474,445	+				-0.7
2,474,445	+				-0.6
2,474,445	+				-0.7
2,474,445	+				+0.3
2,474,445	+				+0.3
2,474,446	-				+0.3
2,474,446	-				-0.7
2,474,446	-				+0.3
2,474,446	-				+0.3
2,474,493	+				+0.3
2,474,494	-				+0.3
2,474,494	-				+0.3
2,474,494	-				+0.3
2,474,779	+		Pf6N2E2_2081	0.64	-0.7
2,474,780	-		Pf6N2E2_2081	0.64	-1.5
2,474,780	-		Pf6N2E2_2081	0.64	+0.7
2,474,965	+				-1.3
2,475,072	-				-0.1
2,475,077	-				-0.7
2,475,094	+				-0.7
2,475,095	-				+0.3
2,475,095	-				+0.3
2,475,124	-				-1.3
2,475,124	-				+0.3
2,475,124	-				-2.5
2,475,124	-				+0.3