Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1938

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,296,329	+				+0.1
2,296,330	-				-0.7
2,296,517	-				-1.3
2,296,519	+				+0.3
2,296,536	-				+0.3
2,296,563	-				-0.8
2,296,740	+				+0.1
2,296,816	+				-0.7
2,296,854	+				-0.7
2,296,854	+				-0.7
2,296,882	-				+0.3
2,297,155	+				+0.3
2,297,191	+				+1.3
2,297,310	-		Pf6N2E2_1938	0.13	+0.3
2,297,644	+		Pf6N2E2_1938	0.49	-0.2
2,297,644	+		Pf6N2E2_1938	0.49	-0.7
2,297,645	-		Pf6N2E2_1938	0.49	-0.4
2,297,648	-		Pf6N2E2_1938	0.49	+0.3
2,297,648	-		Pf6N2E2_1938	0.49	+0.3
2,297,794	-		Pf6N2E2_1938	0.65	-0.7
2,297,796	+		Pf6N2E2_1938	0.65	+0.3
2,297,796	+		Pf6N2E2_1938	0.65	-0.7
2,297,884	+		Pf6N2E2_1938	0.74	+0.2
2,297,884	+		Pf6N2E2_1938	0.74	+0.3
2,297,884	+		Pf6N2E2_1938	0.74	+0.3
2,297,884	+		Pf6N2E2_1938	0.74	+0.3
2,297,922	+		Pf6N2E2_1938	0.78	+0.5
2,298,028	+		Pf6N2E2_1938	0.90	-0.7
2,298,158	+				+0.3
2,298,159	-				+0.3
2,298,252	+				+0.3
2,298,253	-				-0.7
2,298,259	+				+1.9
2,298,259	+				+0.3
2,298,259	+				-0.7
2,298,273	+				+1.4
2,298,273	+				-0.7
2,298,273	+				+0.3
2,298,273	+				-1.0
2,298,273	+				+0.3
2,298,274	-				+0.3
2,298,274	-				+0.3
2,298,274	-				-2.3
2,298,274	-				-1.0
2,298,274	-				-2.0
2,298,342	-				-0.7
2,298,344	+				+0.3
2,298,345	-				+0.3
2,298,381	+				-0.7
2,298,382	-				+0.3
2,298,420	-				+1.3
2,298,420	-				+0.3
2,298,526	-		Pf6N2E2_1939	0.14	+0.3
2,298,807	+		Pf6N2E2_1939	0.26	+0.3
2,298,807	+		Pf6N2E2_1939	0.26	+0.3
2,298,808	-		Pf6N2E2_1939	0.26	-0.7
2,298,808	-		Pf6N2E2_1939	0.26	-1.3
2,299,040	+		Pf6N2E2_1939	0.35	+0.3
2,299,043	+		Pf6N2E2_1939	0.35	+0.3
2,299,043	+		Pf6N2E2_1939	0.35	+0.3
2,299,085	+		Pf6N2E2_1939	0.37	-0.7
2,299,086	-		Pf6N2E2_1939	0.37	-0.7
2,299,086	-		Pf6N2E2_1939	0.37	+0.3