Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1864

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,207,251	+		Pf6N2E2_1863	0.66	-0.7
2,207,369	-		Pf6N2E2_1863	0.75	+0.3
2,207,379	-		Pf6N2E2_1863	0.76	+0.3
2,207,379	-		Pf6N2E2_1863	0.76	+0.3
2,207,811	-				-0.3
2,207,850	-				-0.8
2,207,850	-				-0.6
2,207,988	+				+0.3
2,207,989	-				+0.3
2,207,989	-				+1.9
2,207,989	-				-1.2
2,208,043	+				-1.5
2,208,116	+				-1.3
2,208,176	+		Pf6N2E2_1864	0.12	-1.3
2,208,190	+		Pf6N2E2_1864	0.14	+0.3
2,208,191	-		Pf6N2E2_1864	0.14	-0.7
2,208,191	-		Pf6N2E2_1864	0.14	-0.6
2,208,269	-		Pf6N2E2_1864	0.26	-1.3
2,208,315	+		Pf6N2E2_1864	0.33	-0.7
2,208,564	+		Pf6N2E2_1864	0.71	+0.3
2,208,564	+		Pf6N2E2_1864	0.71	-0.7
2,208,565	-		Pf6N2E2_1864	0.71	+0.3
2,208,569	-		Pf6N2E2_1864	0.72	-1.3
2,208,569	-		Pf6N2E2_1864	0.72	+0.3
2,208,569	-		Pf6N2E2_1864	0.72	-1.3
2,208,569	-		Pf6N2E2_1864	0.72	+0.3
2,208,579	+		Pf6N2E2_1864	0.73	-2.7
2,208,746	-				+0.3
2,208,746	-				+0.3
2,208,754	+				-0.3
2,208,755	-				+0.3
2,208,775	-				+0.3
2,208,929	-		Pf6N2E2_1865	0.18	+0.3
2,208,960	+		Pf6N2E2_1865	0.21	-0.3
2,208,960	+		Pf6N2E2_1865	0.21	-0.6
2,208,973	+		Pf6N2E2_1865	0.23	+0.3
2,208,973	+		Pf6N2E2_1865	0.23	+0.3
2,209,301	+		Pf6N2E2_1865	0.60	+0.3
2,209,318	+		Pf6N2E2_1865	0.62	-0.9
2,209,319	-		Pf6N2E2_1865	0.62	+0.3
2,209,319	-		Pf6N2E2_1865	0.62	+0.3
2,209,455	+		Pf6N2E2_1865	0.77	-0.7
2,209,513	+		Pf6N2E2_1865	0.84	+0.3
2,209,513	+		Pf6N2E2_1865	0.84	-0.5
2,209,514	-		Pf6N2E2_1865	0.84	-0.7
2,209,514	-		Pf6N2E2_1865	0.84	+0.3
2,209,592	+				-0.7
2,209,592	+				+0.3
2,209,711	-		Pf6N2E2_1866	0.23	+0.3